From 0b9f73604cf9d6b6c9a2381a5ed2a159732936d8 Mon Sep 17 00:00:00 2001 From: Robrecht Cannoodt Date: Tue, 17 Sep 2024 09:06:30 +0200 Subject: [PATCH] rename api files --- common | 2 +- src/api/comp_control_method.yaml | 4 ++-- src/api/comp_data_processor.yaml | 4 ++-- src/api/comp_method.yaml | 4 ++-- src/api/{file_test_h5ad.yaml => file_test.yaml} | 0 src/api/{file_train_h5ad.yaml => file_train.yaml} | 0 src/workflows/process_datasets/config.vsh.yaml | 4 ++-- src/workflows/run_benchmark/config.vsh.yaml | 4 ++-- 8 files changed, 11 insertions(+), 11 deletions(-) rename src/api/{file_test_h5ad.yaml => file_test.yaml} (100%) rename src/api/{file_train_h5ad.yaml => file_train.yaml} (100%) diff --git a/common b/common index bf64ebc..f264283 160000 --- a/common +++ b/common @@ -1 +1 @@ -Subproject commit bf64ebcaef096f37013733351a08671f7caca896 +Subproject commit f2642835c89264e0a43e87e3f6c588c6be4902e7 diff --git a/src/api/comp_control_method.yaml b/src/api/comp_control_method.yaml index 4d767d8..db78719 100644 --- a/src/api/comp_control_method.yaml +++ b/src/api/comp_control_method.yaml @@ -13,11 +13,11 @@ info: in the task. arguments: - name: --input_train - __merge__: file_train_h5ad.yaml + __merge__: file_train.yaml required: true direction: input - name: --input_test - __merge__: file_test_h5ad.yaml + __merge__: file_test.yaml required: true direction: input - name: "--input_solution" diff --git a/src/api/comp_data_processor.yaml b/src/api/comp_data_processor.yaml index 184bc54..019c9ba 100644 --- a/src/api/comp_data_processor.yaml +++ b/src/api/comp_data_processor.yaml @@ -12,11 +12,11 @@ arguments: direction: input required: true - name: "--output_train" - __merge__: file_train_h5ad.yaml + __merge__: file_train.yaml direction: output required: true - name: "--output_test" - __merge__: file_test_h5ad.yaml + __merge__: file_test.yaml direction: output required: true - name: "--output_solution" diff --git a/src/api/comp_method.yaml b/src/api/comp_method.yaml index d7be957..4c629b8 100644 --- a/src/api/comp_method.yaml +++ b/src/api/comp_method.yaml @@ -8,11 +8,11 @@ info: A method to predict the task effects. arguments: - name: --input_train - __merge__: file_train_h5ad.yaml + __merge__: file_train.yaml required: true direction: input - name: "--input_test" - __merge__: file_test_h5ad.yaml + __merge__: file_test.yaml direction: input required: true - name: --output diff --git a/src/api/file_test_h5ad.yaml b/src/api/file_test.yaml similarity index 100% rename from src/api/file_test_h5ad.yaml rename to src/api/file_test.yaml diff --git a/src/api/file_train_h5ad.yaml b/src/api/file_train.yaml similarity index 100% rename from src/api/file_train_h5ad.yaml rename to src/api/file_train.yaml diff --git a/src/workflows/process_datasets/config.vsh.yaml b/src/workflows/process_datasets/config.vsh.yaml index 24d03a7..64ff740 100644 --- a/src/workflows/process_datasets/config.vsh.yaml +++ b/src/workflows/process_datasets/config.vsh.yaml @@ -11,11 +11,11 @@ argument_groups: - name: Outputs arguments: - name: "--output_train" - __merge__: /src/api/file_train_h5ad.yaml + __merge__: /src/api/file_train.yaml required: true direction: output - name: "--output_test" - __merge__: /src/api/file_test_h5ad.yaml + __merge__: /src/api/file_test.yaml required: true direction: output - name: "--output_solution" diff --git a/src/workflows/run_benchmark/config.vsh.yaml b/src/workflows/run_benchmark/config.vsh.yaml index 6b3a3d5..904a2b6 100644 --- a/src/workflows/run_benchmark/config.vsh.yaml +++ b/src/workflows/run_benchmark/config.vsh.yaml @@ -5,12 +5,12 @@ argument_groups: - name: Inputs arguments: - name: "--input_train" - __merge__: /src/api/file_train_h5ad.yaml + __merge__: /src/api/file_train.yaml type: file direction: input required: true - name: "--input_test" - __merge__: /src/api/file_test_h5ad.yaml + __merge__: /src/api/file_test.yaml type: file direction: input required: true