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[PRE REVIEW]: Finch: MinHashing for Sequencing Data with Abundance Calculation and Adaptive Filtering #378

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whedon opened this issue Aug 25, 2017 · 23 comments
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@whedon
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whedon commented Aug 25, 2017

Submitting author: @bovee (Roderick Boveee)
Repository: https://github.com/onecodex/finch-rs
Version: v0.1.2
Editor: @biorelated
Reviewer: @HadrienG

Author instructions

Thanks for submitting your paper to JOSS @bovee. The JOSS editor (shown at the top of this issue) will work with you on this issue to find a reviewer for your submission before creating the main review issue.

@bovee if you have any suggestions for potential reviewers then please mention them here in this thread. In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission.

Editor instructions

The JOSS submission bot @whedon is here to help you find and assign reviewers and start the main review. To find out what @whedon can do for you type:

@whedon commands
@whedon
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whedon commented Aug 25, 2017

Hello human, I'm @whedon. I'm here to help you with some common editorial tasks for JOSS.

For a list of things I can do to help you, just type:

@whedon commands

@boydgreenfield
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@whedon commands

@whedon
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whedon commented Sep 5, 2017

Here are some things you can ask me to do:

# List all of Whedon's capabilities
@whedon commands

# Assign a GitHub user as the reviewer of this submission
@whedon assign @username as reviewer

# List the GitHub usernames of the JOSS editors
@whedon list editors

# List of JOSS reviewers together with programming language preferences and domain expertise
@whedon list reviewers

# Change editorial assignment
@whedon assign @username as editor

# Set the software archive DOI at the top of the issue e.g.
@whedon set 10.0000/zenodo.00000 as archive

# Open the review issue
@whedon start review

🚧 Important 🚧

This is all quite new. Please make sure you check the top of the issue after running a @whedon command (you might also need to refresh the page to see the issue update).

@bovee bovee mentioned this issue Sep 5, 2017
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@arfon
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arfon commented Sep 21, 2017

@biorelated @mgymrek would either of you be willing to edit this submission for JOSS?

@bovee
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bovee commented Oct 19, 2017

Just checking in; is there anything we can do to help this submission along?

@arfon
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arfon commented Oct 20, 2017

@bovee - apologies for the delay here. We're struggling a little to find an editor to handle this submission.

@pjotrp - any chance you'd be willing to edit this one?

@george-githinji
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@arfon happy to edit this.

@arfon
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arfon commented Oct 20, 2017

@arfon happy to edit this.

🎉 thanks @biorelated

@arfon
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arfon commented Oct 20, 2017

@whedon assign @biorelated as editor

@whedon
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whedon commented Oct 20, 2017

OK, the editor is @biorelated

@bovee
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bovee commented Oct 20, 2017

@arfon @biorelated Thanks!

@boydgreenfield
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boydgreenfield commented Nov 13, 2017

@biorelated Thanks for offering to be the editor! I appreciate that this falls into your (probably quite limited) spare time, but have you had a chance to take a look yet? Please don't hesitate to ping me or @bovee if we can be helpful in any way.

@arfon
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arfon commented Dec 9, 2017

@biorelated - how are you getting along finding a reviewer for this submission?

@george-githinji
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@arfon @boydgreenfield @bovee My sincere apologies for this delay. I have not had a reviewer for this. I am happy for another editor to take it. Meanwhile I will contact a couple more reviewers. Thanks.

@openjournals openjournals deleted a comment from whedon Dec 11, 2017
@george-githinji
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@HadrienG @JaroslavHron Would you mind reviewing this publication us?
Thank you.

@HadrienG
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@biorelated I'd be happy to review this.

@george-githinji
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@whedon assign @HadrienG as reviewer

@whedon
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whedon commented Dec 13, 2017

OK, the reviewer is @HadrienG

@george-githinji
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@whedon start review magic-word=banana

@whedon
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whedon commented Dec 13, 2017

You didn't say the magic word! Try this:

@whedon start review magic-word=bananas

@george-githinji
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@whedon start review magic-word=bananas

@whedon
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whedon commented Dec 13, 2017

OK, I've started the review over in #505. Feel free to close this issue now!

@george-githinji
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Thank you @HadrienG for agreeing to take time to review this work. Please let me know if there any issues or concerns. The review is on #505.

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