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I am trying to build a Cellbase server but I have found a problem loading the "genome" data:
$ cellbase-admin.sh load --db cellbase_hsapiens_grch38_v5 -i data_cellbase/grch38/homo_sapiens_grch38/generated_json -L debug -d genome &> /opt/cellbase/load_genome.log
2022-12-12 22:27:52 [main] INFO LoadRunner:179 - 1549969 records read from 'data_cellbase/grch38/homo_sapiens_grch38/generated_json/genome_sequence.json.gz'
2022-12-12 22:27:52 [main] INFO LoadRunner:130 - All the '1549969' records have been loaded into the database
2022-12-12 22:27:52 [main] INFO LoadCommandExecutor:556 - Loading indexes for 'genome_info__v1' collection ...
2022-12-12 22:27:52 [main] ERROR IndexManager:105 - Could not create index for collection genome_info__v1: no defined index was found
2022-12-12 22:27:52 [main] INFO LoadCommandExecutor:556 - Loading indexes for 'genome_sequence__v1' collection ...
2022-12-12 22:28:05 [main] INFO IndexManager:103 - Loaded index for genome_sequence__v1
I have been investigated and try different ways to execute the "load" but I don't solve the problem.
What I doing bad?
Please, Do you mind to enlighten me?
Thanks a lot!
The text was updated successfully, but these errors were encountered:
Hello Cellbase team,
I am trying to build a Cellbase server but I have found a problem loading the "genome" data:
$ cellbase-admin.sh load --db cellbase_hsapiens_grch38_v5 -i data_cellbase/grch38/homo_sapiens_grch38/generated_json -L debug -d genome &> /opt/cellbase/load_genome.log
2022-12-12 22:27:52 [main] INFO LoadRunner:179 - 1549969 records read from 'data_cellbase/grch38/homo_sapiens_grch38/generated_json/genome_sequence.json.gz'
2022-12-12 22:27:52 [main] INFO LoadRunner:130 - All the '1549969' records have been loaded into the database
2022-12-12 22:27:52 [main] INFO LoadCommandExecutor:556 - Loading indexes for 'genome_info__v1' collection ...
2022-12-12 22:27:52 [main] ERROR IndexManager:105 - Could not create index for collection genome_info__v1: no defined index was found
2022-12-12 22:27:52 [main] INFO LoadCommandExecutor:556 - Loading indexes for 'genome_sequence__v1' collection ...
2022-12-12 22:28:05 [main] INFO IndexManager:103 - Loaded index for genome_sequence__v1
I have been investigated and try different ways to execute the "load" but I don't solve the problem.
What I doing bad?
Please, Do you mind to enlighten me?
Thanks a lot!
The text was updated successfully, but these errors were encountered: