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Implement IBD algorithm #163

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jtarraga opened this issue Dec 11, 2018 · 0 comments
Open

Implement IBD algorithm #163

jtarraga opened this issue Dec 11, 2018 · 0 comments
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v1.4.0

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jtarraga commented Dec 11, 2018 •
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Identity-by-descent (IBD) is a good estimation to find pairs of individuals who look too similar to each other. IBD scores are computed from the identity-by-state (IBS) scores. Note that the IBS algorithm is already implemented in the biodata package.

IBD implementation will be based-on PLINK, http://zzz.bwh.harvard.edu/plink/ibdibs.shtml#genome

PLINK package will be used to validate our results.
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