diff --git a/schemas/computation.schema.tpl.json b/schemas/computation.schema.tpl.json index 6cf9410..6ca94eb 100644 --- a/schemas/computation.schema.tpl.json +++ b/schemas/computation.schema.tpl.json @@ -8,36 +8,36 @@ "environment": { "_instruction": "Add the computational environment in which this computation was executed.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/Environment", - "https://openminds.ebrains.eu/core/WebServiceVersion" + "computation:Environment", + "core:WebServiceVersion" ] }, "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/SoftwareVersion" + "computation:LocalFile", + "core:File", + "core:FileBundle", + "core:SoftwareVersion" ] }, "launchConfiguration": { "_instruction": "Add the launch configuration of this computation (e.g., command-line arguments).", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LaunchConfiguration" + "computation:LaunchConfiguration" ] }, "output": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileArchive", - "https://openminds.ebrains.eu/core/FileBundle" + "computation:LocalFile", + "core:File", + "core:FileArchive", + "core:FileBundle" ] }, "recipe": { "_instruction": "Add the workflow recipe version used for this computation.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion" + "computation:WorkflowRecipeVersion" ] }, "resourceUsage": { @@ -46,8 +46,8 @@ "uniqueItems": true, "_instruction": "Enter all resources used during this computation (e.g., core-hours or energy).", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue", - "https://openminds.ebrains.eu/core/QuantitativeValueRange" + "core:QuantitativeValue", + "core:QuantitativeValueRange" ] }, "startedBy": { @@ -59,7 +59,7 @@ "status": { "_instruction": "Enter the current status of this computation.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ActionStatusType" + "controlledTerms:ActionStatusType" ] }, "tag": { @@ -77,7 +77,7 @@ "uniqueItems": true, "_instruction": "Add all analysis techniques that were used in this computation.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/AnalysisTechnique" + "controlledTerms:AnalysisTechnique" ] }, "wasInformedBy": { diff --git a/schemas/dataAnalysis.schema.tpl.json b/schemas/dataAnalysis.schema.tpl.json index 0ed3611..433d8c4 100644 --- a/schemas/dataAnalysis.schema.tpl.json +++ b/schemas/dataAnalysis.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/DataAnalysis", + "_type": "computation:DataAnalysis", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" @@ -7,12 +7,12 @@ "properties": { "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/SoftwareVersion", - "https://openminds.ebrains.eu/sands/BrainAtlasVersion", - "https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion" + "computation:LocalFile", + "core:File", + "core:FileBundle", + "core:SoftwareVersion", + "sands:BrainAtlasVersion", + "sands:CommonCoordinateSpaceVersion" ] } } diff --git a/schemas/dataCopy.schema.tpl.json b/schemas/dataCopy.schema.tpl.json index bd0cef3..a36ca28 100644 --- a/schemas/dataCopy.schema.tpl.json +++ b/schemas/dataCopy.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/DataCopy", + "_type": "computation:DataCopy", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" @@ -7,20 +7,20 @@ "properties": { "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/computation/ValidationTestVersion", - "https://openminds.ebrains.eu/core/DatasetVersion", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/ModelVersion", - "https://openminds.ebrains.eu/core/SoftwareVersion" + "computation:LocalFile", + "computation:ValidationTestVersion", + "core:DatasetVersion", + "core:File", + "core:FileBundle", + "core:ModelVersion", + "core:SoftwareVersion" ] }, "output": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle" + "computation:LocalFile", + "core:File", + "core:FileBundle" ] } } diff --git a/schemas/environment.schema.tpl.json b/schemas/environment.schema.tpl.json index 677ab3b..1a6f21a 100644 --- a/schemas/environment.schema.tpl.json +++ b/schemas/environment.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/Environment", + "_type": "computation:Environment", "required": [ "hardware", "name" @@ -8,7 +8,7 @@ "configuration": { "_instruction": "Add the configuration of this computational environment.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Configuration" + "core:Configuration" ] }, "description": { @@ -18,7 +18,7 @@ "hardware": { "_instruction": "Add the hardware system on which this computational environment runs.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/HardwareSystem" + "computation:HardwareSystem" ] }, "name": { @@ -31,7 +31,7 @@ "uniqueItems": true, "_instruction": "Add all software versions available in this computational environment.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:SoftwareVersion" ] } } diff --git a/schemas/genericComputation.schema.tpl.json b/schemas/genericComputation.schema.tpl.json index 13aa7ae..4159a46 100644 --- a/schemas/genericComputation.schema.tpl.json +++ b/schemas/genericComputation.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/GenericComputation", + "_type": "computation:GenericComputation", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" diff --git a/schemas/hardwareSystem.schema.tpl.json b/schemas/hardwareSystem.schema.tpl.json index b62c5a3..3685edf 100644 --- a/schemas/hardwareSystem.schema.tpl.json +++ b/schemas/hardwareSystem.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/HardwareSystem", + "_type": "computation:HardwareSystem", "required": [ "name" ], diff --git a/schemas/launchConfiguration.schema.tpl.json b/schemas/launchConfiguration.schema.tpl.json index 5b64490..5e3876d 100644 --- a/schemas/launchConfiguration.schema.tpl.json +++ b/schemas/launchConfiguration.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/LaunchConfiguration", + "_type": "computation:LaunchConfiguration", "required": [ "executable" ], @@ -19,7 +19,7 @@ "environmentVariable": { "_instruction": "Add any environment variables defined by this launch configuration.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/PropertyValueList" + "core:PropertyValueList" ] }, "executable": { diff --git a/schemas/localFile.schema.tpl.json b/schemas/localFile.schema.tpl.json index 182282c..9c57061 100644 --- a/schemas/localFile.schema.tpl.json +++ b/schemas/localFile.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/LocalFile", + "_type": "computation:LocalFile", "_categories": [ "fileOrigin" ], @@ -15,7 +15,7 @@ "copyOf": { "_instruction": "Add the file of which this is a copy.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File" + "core:File" ] }, "dataType": { @@ -24,19 +24,19 @@ "uniqueItems": true, "_instruction": "Add all data types that are specifically represented in this local file instance.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/DataType" + "controlledTerms:DataType" ] }, "format": { "_instruction": "Add the content type of this local file instance.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "hash": { "_instruction": "Add the hash that was generated for this local file instance.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Hash" + "core:Hash" ] }, "name": { @@ -50,13 +50,13 @@ "specialUsageRole": { "_instruction": "Add the special usage role of this local file instance.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/FileUsageRole" + "controlledTerms:FileUsageRole" ] }, "storageSize": { "_instruction": "Enter the storage size of this local file instance.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue" + "core:QuantitativeValue" ] } } diff --git a/schemas/modelValidation.schema.tpl.json b/schemas/modelValidation.schema.tpl.json index 057574e..d148065 100644 --- a/schemas/modelValidation.schema.tpl.json +++ b/schemas/modelValidation.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/ModelValidation", + "_type": "computation:ModelValidation", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" @@ -7,19 +7,19 @@ "properties": { "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/computation/ValidationTestVersion", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/ModelVersion", - "https://openminds.ebrains.eu/core/SoftwareVersion" + "computation:LocalFile", + "computation:ValidationTestVersion", + "core:File", + "core:FileBundle", + "core:ModelVersion", + "core:SoftwareVersion" ] }, "output": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle" + "computation:LocalFile", + "core:File", + "core:FileBundle" ] }, "score": { diff --git a/schemas/optimization.schema.tpl.json b/schemas/optimization.schema.tpl.json index fce0d9e..6ddbe34 100644 --- a/schemas/optimization.schema.tpl.json +++ b/schemas/optimization.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/Optimization", + "_type": "computation:Optimization", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" @@ -7,19 +7,19 @@ "properties": { "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/ModelVersion", - "https://openminds.ebrains.eu/core/SoftwareVersion" + "computation:LocalFile", + "core:File", + "core:FileBundle", + "core:ModelVersion", + "core:SoftwareVersion" ] }, "output": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/ModelVersion" + "computation:LocalFile", + "core:File", + "core:FileBundle", + "core:ModelVersion" ] } } diff --git a/schemas/simulation.schema.tpl.json b/schemas/simulation.schema.tpl.json index 145f576..bda8f75 100644 --- a/schemas/simulation.schema.tpl.json +++ b/schemas/simulation.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/Simulation", + "_type": "computation:Simulation", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" @@ -7,11 +7,11 @@ "properties": { "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/LocalFile", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/ModelVersion", - "https://openminds.ebrains.eu/core/SoftwareVersion" + "computation:LocalFile", + "core:File", + "core:FileBundle", + "core:ModelVersion", + "core:SoftwareVersion" ] } } diff --git a/schemas/softwareAgent.schema.tpl.json b/schemas/softwareAgent.schema.tpl.json index 992a8d4..4fedea4 100644 --- a/schemas/softwareAgent.schema.tpl.json +++ b/schemas/softwareAgent.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/SoftwareAgent", + "_type": "computation:SoftwareAgent", "_categories": [ "agent" ], @@ -11,7 +11,7 @@ "environment": { "_instruction": "Add the computational environment in which this software agent was running.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/Environment" + "computation:Environment" ] }, "name": { @@ -21,7 +21,7 @@ "software": { "_instruction": "Add the software version that is being run as this software agent.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:SoftwareVersion" ] } } diff --git a/schemas/validationTest.schema.tpl.json b/schemas/validationTest.schema.tpl.json index b12341b..3532639 100644 --- a/schemas/validationTest.schema.tpl.json +++ b/schemas/validationTest.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/ValidationTest", + "_type": "computation:ValidationTest", "_extends": "/core/schemas/products/researchProduct.schema.tpl.json", "required": [ "developer" @@ -17,7 +17,7 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product. Note that this digital identifier will be used to reference all attached research product versions.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI" + "core:DOI" ] }, "hasVersion": { @@ -26,7 +26,7 @@ "uniqueItems": true, "_instruction": "Add all versions of this validation test.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/ValidationTestVersion" + "computation:ValidationTestVersion" ] }, "referenceDataAcquisition": { @@ -35,19 +35,19 @@ "uniqueItems": true, "_instruction": "Add all acquisition techniques that were used to obtain the reference data for this validation test.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Technique" + "controlledTerms:Technique" ] }, "scope": { "_instruction": "Add the scope of this validation test.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ModelScope" + "controlledTerms:ModelScope" ] }, "scoreType": { "_instruction": "Add the type of score calculated in this validation test.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/DifferenceMeasure" + "controlledTerms:DifferenceMeasure" ] }, "studyTarget": { diff --git a/schemas/validationTestVersion.schema.tpl.json b/schemas/validationTestVersion.schema.tpl.json index 6890fee..0f8bb61 100644 --- a/schemas/validationTestVersion.schema.tpl.json +++ b/schemas/validationTestVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/ValidationTestVersion", + "_type": "computation:ValidationTestVersion", "_extends": "/core/schemas/products/researchProductVersion.schema.tpl.json", "required": [ "format" @@ -8,10 +8,10 @@ "configuration": { "_instruction": "Add the configuration information for this validation test version (e.g., arguments to the SciUnit class).", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Configuration", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/PropertyValueList", - "https://openminds.ebrains.eu/core/WebResource" + "core:Configuration", + "core:File", + "core:PropertyValueList", + "core:WebResource" ] }, "developer": { @@ -26,7 +26,7 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI" + "core:DOI" ] }, "entryPoint": { @@ -36,7 +36,7 @@ "format": { "_instruction": "Add the content type of this validation test version, or the content types of the files composing the validation test version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "isAlternativeVersionOf": { @@ -45,13 +45,13 @@ "uniqueItems": true, "_instruction": "Add all validation test versions that can be used alternatively to this validation test version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/ValidationTestVersion" + "computation:ValidationTestVersion" ] }, "isNewVersionOf": { "_instruction": "Add the validation test version preceding this validation test version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/ValidationTestVersion" + "computation:ValidationTestVersion" ] }, "license": { @@ -60,7 +60,7 @@ "uniqueItems": true, "_instruction": "Add the license of this validation test version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/License" + "core:License" ] }, "referenceData": { @@ -69,10 +69,10 @@ "uniqueItems": true, "_instruction": "Add the data that define the expected output of this validation test version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/WebResource" + "core:DOI", + "core:File", + "core:FileBundle", + "core:WebResource" ] } } diff --git a/schemas/visualization.schema.tpl.json b/schemas/visualization.schema.tpl.json index fa44309..e807af2 100644 --- a/schemas/visualization.schema.tpl.json +++ b/schemas/visualization.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/Visualization", + "_type": "computation:Visualization", "_extends": "computation.schema.tpl.json", "_categories": [ "computationalActivity" diff --git a/schemas/workflowExecution.schema.tpl.json b/schemas/workflowExecution.schema.tpl.json index afcfb07..8c5ca49 100644 --- a/schemas/workflowExecution.schema.tpl.json +++ b/schemas/workflowExecution.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/WorkflowExecution", + "_type": "computation:WorkflowExecution", "required": [ "stages" ], @@ -7,14 +7,14 @@ "configuration": { "_instruction": "Add the configuration information for this workflow execution.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Configuration", - "https://openminds.ebrains.eu/core/File" + "core:Configuration", + "core:File" ] }, "recipe": { "_instruction": "Add the workflow recipe version used for this workflow execution.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion" + "computation:WorkflowRecipeVersion" ] }, "stage": { diff --git a/schemas/workflowRecipe.schema.tpl.json b/schemas/workflowRecipe.schema.tpl.json index b2f7184..f016fd6 100644 --- a/schemas/workflowRecipe.schema.tpl.json +++ b/schemas/workflowRecipe.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/WorkflowRecipe", + "_type": "computation:WorkflowRecipe", "_extends": "/core/schemas/products/researchProduct.schema.tpl.json", "required": [ "developer" @@ -17,7 +17,7 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product. Note that this digital identifier will be used to reference all attached research product versions.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI" + "core:DOI" ] }, "hasVersion": { @@ -26,7 +26,7 @@ "uniqueItems": true, "_instruction": "Add all versions of this workflow recipe.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion" + "computation:WorkflowRecipeVersion" ] } } diff --git a/schemas/workflowRecipeVersion.schema.tpl.json b/schemas/workflowRecipeVersion.schema.tpl.json index 3419811..d4c41fc 100644 --- a/schemas/workflowRecipeVersion.schema.tpl.json +++ b/schemas/workflowRecipeVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion", + "_type": "computation:WorkflowRecipeVersion", "_extends": "/core/schemas/products/researchProductVersion.schema.tpl.json", "required": [ "format" @@ -17,13 +17,13 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI" + "core:DOI" ] }, "format": { "_instruction": "Add the content type of this workflow recipe version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "hasPart": { @@ -32,10 +32,10 @@ "uniqueItems": true, "_instruction": "Add all entities that are components of this workflow recipe version (e.g., other workflow recipe versions or software used in this workflow).", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/SoftwareVersion" + "computation:WorkflowRecipeVersion", + "core:File", + "core:FileBundle", + "core:SoftwareVersion" ] }, "isAlternativeVersionOf": { @@ -44,13 +44,13 @@ "uniqueItems": true, "_instruction": "Add all workflow recipe versions that can be used alternatively to this workflow recipe version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion" + "computation:WorkflowRecipeVersion" ] }, "isNewVersionOf": { "_instruction": "Add the workflow recipe version preceding this workflow recipe version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/computation/WorkflowRecipeVersion" + "computation:WorkflowRecipeVersion" ] }, "license": { @@ -59,7 +59,7 @@ "uniqueItems": true, "_instruction": "Add all licenses of this workflow recipe version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/License" + "core:License" ] } } diff --git a/version.txt b/version.txt index 626799f..8c1384d 100644 --- a/version.txt +++ b/version.txt @@ -1 +1 @@ -v1 +v2