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}, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PoCi-PrCu_2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PoCi-RAC_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PoCi-SF_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PrC-Ins_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PrC-SF_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PrC-SM_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_PrC-SP_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_RAC-SF_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_RAC-SF_1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_RMF-SF_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_RMF-SF_1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_SM-Ins_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_SP-SM_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_ST-Ins_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_ST-TT_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_superficialWhiteMatter" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_Tr-Ins_0" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/SWMA_Tr-SF_0" - } - ], - "ontologyIdentifier": null - }, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/SWMA_2018" - } - ], - "homepage": null, - "howToCite": null, - "shortName": "Superficial White Matter Atlas", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/homoSapiens" - } -} diff --git a/instances/atlas/brainAtlas/Schaefer-400p.jsonld b/instances/atlas/brainAtlas/Schaefer-400p.jsonld deleted file mode 100644 index 0afd78c70..000000000 --- a/instances/atlas/brainAtlas/Schaefer-400p.jsonld +++ /dev/null @@ -1,45 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/brainAtlas/Schaefer-400p", - "@type": "https://openminds.ebrains.eu/sands/BrainAtlas", - "abbreviation": "Schaefer-400p", - "author": null, - "custodian": null, - "description": null, - "digitalIdentifier": null, - "fullName": "Schaefer Atlas with 400 Parcellation", - "hasTerminology": { - "@type": "https://openminds.ebrains.eu/sands/ParcellationTerminology", - "dataLocation": null, - "hasEntity": null, - "ontologyIdentifier": null - }, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/Schaefer-400p_2018-FSL-MNI152-yeo7n" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/Schaefer-400p_2018-FSL-MNI152-yeo17n" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/Schaefer-400p_2018-FSL-MNI152-kong17n" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/Schaefer-400p_2018-fsLR32k-yeo7n" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/Schaefer-400p_2018-fsLR32k-yeo17n" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/Schaefer-400p_2018-fsLR32k-kong17n" - } - ], - "homepage": "https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/brain_parcellation/Schaefer2018_LocalGlobal", - "howToCite": null, - "shortName": "Schaefer Atlas (400p)", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/homoSapiens" - } -} diff --git a/instances/atlas/brainAtlas/WHSSD.jsonld b/instances/atlas/brainAtlas/WHSSD.jsonld deleted file mode 100644 index fd3681db7..000000000 --- a/instances/atlas/brainAtlas/WHSSD.jsonld +++ /dev/null @@ -1,1044 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/brainAtlas/WHSSDatlas", - "@type": "https://openminds.ebrains.eu/sands/BrainAtlas", - "abbreviation": "WHSSDatlas", - "author": null, - "custodian": null, - "description": "The Waxholm Space Atlas of the Sprague Dawley Rat Brain is an open access volumetric atlas. The delineations are defined in isotropic magnetic resonance (39 micrometre) and diffusion tensor (78 micrometre) images acquired ex vivo from an 80 day old male rat at the Duke Center for In Vivo Microscopy. Coordinates for navigating the volume are provided by the Waxholm Space coordinate system. The location of bregma and lambda are also identified as anchors towards stereotaxic space. The atlas (with MRI/DTI anatomical volumes, delineation- and label files) is hosted at [NITRC](https://www.nitrc.org/projects/whs-sd-atlas/) along with configuration files for ITK-SNAP, the Mouse BIRN Atlasing Toolkit, and PMOD. The atlas has been adopted as the standard rat brain atlas for the EBRAINS infrastructure, see [EBRAINS Rat Brain Atlas](https://ebrains.eu/service/rat-brain-atlas/). The atlas (RRID: SCR_017124) is shared under the CC BY-SA 4.0 licence. Note that the licence was changed to from CC BY-SA-NC to CC BY-SA on October 1, 2021.", - "digitalIdentifier": { - "@id": "https://scicrunch.org/resolver/RRID:SCR_017124" - }, - "fullName": "Waxholm Space Atlas of the Sprague Dawley Rat Brain", - "hasTerminology": { - "@type": "https://openminds.ebrains.eu/sands/ParcellationTerminology", - "dataLocation": null, - "hasEntity": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_brain" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_whiteMatter" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_olfactoryWhiteMatter" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralOlfactoryTract" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_corpusCallosumAndAssociatedSubcorticalWhiteMatter" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_anteriorCommissure" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_anteriorCommissureAnteriorLimb" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_anteriorCommissurePosteriorLimb" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_anteriorCommissureIntrabulbarPart" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_hippocampalWhiteMatter" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_alveusOfTheHippocampus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventralHippocampalCommissure" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_fornix" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_fimbriaOfTheHippocampus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_corticofugalPathways" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_corticofugalTractAndCoronaRadiata" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_pyramidalDecussation" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_medialLemniscus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_medialLemniscusUnspecified" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_medialLemniscusDecussation" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_thalamicTracts" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_externalMedullaryLamina" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_externalMedullaryLaminaUnspecified" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_externalMedullaryLaminaAuditoryRadiation" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_internalMedullaryLamina" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_intramedullaryThalamicArea" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_superiorCerebellarPeduncleAndPrerubralField" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_pretectothalamicLamina" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_mammillotegmentalTract" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_commissuralStriaTerminalis" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_fasciculusRetroflexus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_striaMedullarisThalami" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_striaTerminalis" - 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}, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_rhombencephalon" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_metencephalon" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_pontineNuclei" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_cerebellum" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_molecularCellLayerOfTheCerebellum" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_cerebellumUnspecified" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_medullaOblongata" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_myelencephalon" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_cochlearNucleusVentralPart" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventralCochlearNucleusAnteriorPart" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventralCochlearNucleusPosteriorPart" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventralCochlearNucleusCapArea" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventralCochlearNucleusGranuleCellLayer" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_cochlearNucleusDorsalPart" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_dorsalCochlearNucleusMolecularLayer" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_dorsalCochlearNucleusFusiformAndGranuleLayer" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_dorsalCochlearNucleusDeepCore" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_spinalTrigeminalNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_periventricularGray" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_superiorOlivaryComplex" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_nucleusOfTheTrapezoidBody" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_superiorParaolivaryNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_medialSuperiorOlive" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralSuperiorOlive" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_superiorPeriolivaryRegion" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventralPeriolivaryNuclei" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_nucleiOfTheLateralLemniscus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusVentralNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusIntermediateNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusDorsalNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_inferiorOlive" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventricularSystem" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_ventricularSystemUnspecified" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_4thVentricle" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_centralCanal" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_spinalCord" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_innerEar" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_vestibularApparatus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_cochlea" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_cochlearNerve" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_vestibularNerve" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_spiralGanglion" - } - ], - "ontologyIdentifier": null - }, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v1.01" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v3.01" - }, - { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v4" - } - ], - "homepage": "https://www.nitrc.org/projects/whs-sd-atlas/", - "howToCite": "Please refer to the atlas by its RRID: SCR_017124, and cite the first publication (Papp et al., 2014) along with the atlas version(s) you have used.", - "shortName": "Waxholm Space Rat Brain Atlas", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/rattusNorvegicus" - } -} diff --git a/instances/atlas/brainAtlasVersion/AAL1_SPM12-v4.jsonld b/instances/atlas/brainAtlasVersion/AAL1_SPM12-v4.jsonld deleted file mode 100644 index 8da34a203..000000000 --- a/instances/atlas/brainAtlasVersion/AAL1_SPM12-v4.jsonld +++ /dev/null @@ -1,186 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/AAL1_SPM12-v4", - "@type": "https://openminds.ebrains.eu/sands/BrainAtlasVersion", - "abbreviation": "AAL1", - "accessibility": { - "@id": "https://openminds.ebrains.eu/instances/productAccessibility/freeAccess" - }, - "author": null, - "coordinateSpace": { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/MNI-Colin27_1998" - }, - "copyright": null, - "custodian": null, - "description": "The AAL1 atlas comprises an anatomical parcellation of the spatially normalized single-subject high-resolution T1 volume (Colin27, 2008) provided by the Montreal Neurological Institute (MNI) which can be used to automatically label individual subject brains of functional studies. The MNI single-subjectmain sulci were first delineated and further used as landmarks for the 3D definition of 45 anatomical volumes of interest (AVOI) in each hemisphere. This procedure was performed using a dedicated software which allowed a 3D following of the sulci course on the edited brain. Regions of interest were then drawn manually with the same software every 2mm on the axial slices of the high-resolution MNI single subject. The 90 AVOI were reconstructed and assigned a label. For automated anatomical labelling of functional studies according to this parcellation method, three procedures are proposed: (1) labelling of an extremum defined by a set of coordinates; (2) percentage of voxels belonging to teach of the AVOI intersected by a sphere centered by a set of coordinates; (3) percentage of voxels belonging to each of the AVOI intersected by an activated cluster. An interface with the Statistical Parametric Mapping (SPM) packages is provided as a freeware to researchers of the neuroimaging community to conduct the automated labelling procedures.", - "digitalIdentifier": null, - "fullDocumentation": null, - "fullName": "Automated Anatomical Labeling Atlas 1", - "funding": null, - "hasTerminology": { - "@type": "https://openminds.ebrains.eu/sands/ParcellationTerminologyVersion", - "dataLocation": null, - "hasEntity": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PRE" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_POST" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_RO" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F3OP" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F3T" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F1M" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_SMA" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PCL" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F1O" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F1MO" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F2O" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_F3O" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_GR" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_OC" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_HES" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_P1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_P2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_AG" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_SMG" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PQ" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_O1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_O2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_O3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_Q" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_V1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_LING" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_FUSI" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T1P" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T2P" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_ACIN" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_MCIN" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PCIN" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_HIP" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PHIP" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_IN" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_AMYG" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_CAU" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PUT" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PAL" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_THA" - } - ], - "ontologyIdentifier": null - }, - "homepage": null, - "howToCite": null, - "isAlternativeVersionOf": null, - "isNewVersionOf": null, - "keyword": null, - "license": { - "@id": "https://openminds.ebrains.eu/instances/licenses/ccByNcNd4.0" - }, - "majorVersionIdentifier": null, - "ontologyIdentifier": null, - "otherContribution": null, - "relatedPublication": null, - "releaseDate": "", - "repository": null, - "shortName": "AAL Atlas 1", - "supportChannel": null, - "type": { - "@id": "https://openminds.ebrains.eu/instances/atlasType/deterministicAtlas" - }, - "usedSpecimen": null, - "versionIdentifier": "SPM12, v4", - "versionInnovation": "This is the 2018 release of the SPM12 version of the AAL Atlas 1 containing 3D definitions of 45 anatomical volumes of interest in each hemisphere." -} diff --git a/instances/atlas/brainAtlasVersion/AMBA_CCFv3-2015.jsonld b/instances/atlas/brainAtlasVersion/AMBA_CCFv3-2015.jsonld deleted file mode 100644 index 8e457d99d..000000000 --- a/instances/atlas/brainAtlasVersion/AMBA_CCFv3-2015.jsonld +++ /dev/null @@ -1,3910 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/AMBA_CCFv3-2015", - "@type": "https://openminds.ebrains.eu/sands/BrainAtlasVersion", - "abbreviation": "AMBA", - "accessibility": { - "@id": "https://openminds.ebrains.eu/instances/productAccessibility/freeAccess" - }, - "author": null, - "coordinateSpace": { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/AMB-CCF_v3" - }, - "copyright": null, - "custodian": null, - "description": null, - "digitalIdentifier": null, - "fullDocumentation": null, - "fullName": "Allen Mouse Brain Atlas", - "funding": null, - "hasTerminology": { - "@type": "https://openminds.ebrains.eu/sands/ParcellationTerminology", - "dataLocation": null, - "hasEntity": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_root" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_basicCellGroupsAndRegions" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_cerebrum" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_cerebralCortex" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_corticalPlate" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_isocortex" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_frontalPoleCerebralCortex" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_frontalPoleLayer1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_frontalPoleLayer2-3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_somatomotorAreas" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_somatomotorAreasLayer1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_somatomotorAreasLayer2-3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_somatomotorAreasLayer5" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_somatomotorAreasLayer6a" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_somatomotorAreasLayer6b" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_primaryMotorArea" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_primaryMotorAreaLayer1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_primaryMotorAreaLayer2-3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_primaryMotorAreaLayer5" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_primaryMotorAreaLayer6a" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_primaryMotorAreaLayer6b" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_secondaryMotorArea" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_secondaryMotorAreaLayer1" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_secondaryMotorAreaLayer2-3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_secondaryMotorAreaLayer5" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_secondaryMotorAreaLayer6a" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AMBA_CCFv3-2015_secondaryMotorAreaLayer6b" - }, - 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Version 2 of the Waxholm Space atlas of the Sprague Dawley rat brain contains 13 new and updated delineations of the hippocampal formation and parahippocampal region, and 66 structure delineations unchanged relative to v1.01. This dataset is hosted on NITRC.org and includes: WHS_SD_rat_atlas_v2.nii.gz: delineation file with anatomical structures; WHS_SD_rat_atlas_v2.label: text file naming anatomical structures; MBAT_WHS_SD_rat_atlas_v2.zip: file describing a suggested hierarchy of the anatomical structures. 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NeuroImage 97, 374-386. DOI: https://doi.org/10.1016/j.neuroimage.2014.04.001\n- Osen KK, Imad J, Wennberg AE, Papp EA, Leergaard TB (2019) Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. NeuroImage 199, 38-56. 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NeuroImage 97, 374-386. DOI: https://doi.org/10.1016/j.neuroimage.2014.04.001\n- Osen KK, Imad J, Wennberg AE, Papp EA, Leergaard TB (2019) Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. NeuroImage 199, 38-56. DOI: https://doi.org/10.1016/j.neuroimage.2019.05.016", - "isAlternativeVersionOf": null, - "isNewVersionOf": { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v2" - }, - "keyword": null, - "license": { - "@id": "https://openminds.ebrains.eu/instances/licenses/ccBy4.0" - }, - "majorVersionIdentifier": null, - "ontologyIdentifier": null, - "otherContribution": null, - "relatedPublication": [ - {"@id": "https://doi.org/10.1016/j.neuroimage.2014.04.001"}, - {"@id": "https://doi.org/10.1016/j.neuroimage.2014.10.017"}, - {"@id": "https://doi.org/10.1016/j.neuroimage.2014.12.080"} - ], - "releaseDate": "2019-05-15", - "repository": null, - "shortName": "Waxholm Space Rat Brain Atlas", - "supportChannel": [ - "support@ebrains.eu", - "https://www.nitrc.org/forum/forum.php?forum_id=9174" - ], - "type": { - "@id": "https://openminds.ebrains.eu/instances/atlasType/deterministicAtlas" - }, - "usedSpecimen": null, - "versionIdentifier": "v3", - "versionInnovation": "Anatomical delineations of 118 brain regions and white matter tracts in the Sprague Dawley rat brain, based on observations in a high resolution magnetic resonance imaging (MRI) volume (DOI: 10.25493/DTSG-ZBS). Version 3 of the Waxholm Space atlas of the Sprague Dawley rat brain contains 41 new and 10 updated delineations related or adjacent to the ascending the auditory system. 65 delineations have remained unchanged relative to v2. This dataset is hosted on NITRC.org and includes: WHS_SD_rat_atlas_v3.nii.gz: delineation file with anatomical structures; WHS_SD_rat_atlas_v3.label: text file naming anatomical structures; MBAT_WHS_SD_rat_atlas_v3.zip: file describing a suggested hierarchy of the anatomical structures. Note: The licence was changed to from CC BY-SA-NC to CC BY-SA on October 1, 2021." -} diff --git a/instances/atlas/brainAtlasVersion/WHSSDatlas_v4.jsonld b/instances/atlas/brainAtlasVersion/WHSSDatlas_v4.jsonld deleted file mode 100644 index 0ae95ea9c..000000000 --- a/instances/atlas/brainAtlasVersion/WHSSDatlas_v4.jsonld +++ /dev/null @@ -1,727 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v4", - "@type": "https://openminds.ebrains.eu/sands/BrainAtlasVersion", - "abbreviation": "WHSSDatlas", - "accessibility": { - "@id": "https://openminds.ebrains.eu/instances/productAccessibility/freeAccess" - }, - "author": null, - "coordinateSpace": { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/WHSSD_v1.01" - }, - "copyright": null, - "custodian": null, - "description": null, - "digitalIdentifier": null, - "fullDocumentation": {"@id": "https://doi.org/10.21203/rs.3.rs-2466303/v1"}, - 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} - ], - "ontologyIdentifier": null - }, - "homepage": "https://www.nitrc.org/projects/whs-sd-atlas/", - "howToCite": "Please refer to the atlas by its RRID: SCR_017124, and cite the following publications:\n- Papp EA, Leergaard TB, Calabrese E, Johnson GA, Bjaalie JG (2014) Waxholm Space atlas of the Sprague Dawley rat brain. NeuroImage 97, 374-386. DOI: https://doi.org/10.1016/j.neuroimage.2014.04.001\n- Heidi Kleven, Ingvild Bjerke, Francisco Clascá et al. Waxholm Space atlas of the rat brain: A 3D atlas supporting data analysis and integration, 07 February 2023, PREPRINT (Version 1) available at Research Square DOI: https://doi.org/10.21203/rs.3.rs-2466303/v1", - "isAlternativeVersionOf": null, - "isNewVersionOf": { - "@id": "https://openminds.ebrains.eu/instances/brainAtlasVersion/WHSSDatlas_v3.01" - }, - "keyword": null, - "license": { - "@id": "https://openminds.ebrains.eu/instances/licenses/ccBy4.0" - }, - "majorVersionIdentifier": null, - "ontologyIdentifier": null, - "otherContribution": null, - "relatedPublication": [ - {"@id":"https://doi.org/10.1016/j.neuroimage.2014.04.001"}, - {"@id":"https://doi.org/10.1016/j.neuroimage.2014.10.017"}, - {"@id":"https://doi.org/10.1016/j.neuroimage.2014.12.080"}, - {"@id":"https://doi.org/10.1016/j.neuroimage.2019.05.016"} - ], - "releaseDate": "2021-10-01", - "repository": null, - "shortName": "Waxholm Space Rat Brain Atlas", - "supportChannel": [ - "support@ebrains.eu", - "https://www.nitrc.org/forum/forum.php?forum_id=9174" - ], - "type": { - "@id": "https://openminds.ebrains.eu/instances/atlasType/deterministicAtlas" - }, - "usedSpecimen": null, - "versionIdentifier": "v4", - "versionInnovation": "Anatomical delineations of 222 brain regions and white matter tracts in the Sprague Dawley rat brain, based on a high resolution magnetic resonance imaging (MRI) volume (DOI: 10.25493/DTSG-ZBS). Version 4 of the Waxholm Space atlas of the Sprague Dawley rat brain contains 112 new and 56 updated delineations related or adjacent to the basal ganglia, thalamus and cortical structures. 54 delineations have remained unchanged and 9 have been completely replaced relative to v3. This dataset is hosted on NITRC.org and includes: WHS_SD_rat_atlas_v4.nii.gz: delineation file with anatomical structures; WHS_SD_rat_atlas_v4.label: text file naming anatomical structures; MBAT_WHS_SD_rat_atlas_v4.zip: file describing a suggested hierarchy of the anatomical structures" -} diff --git a/instances/atlas/commonCoordinateSpace/AMB-CCF.jsonld b/instances/atlas/commonCoordinateSpace/AMB-CCF.jsonld deleted file mode 100644 index f322beaf7..000000000 --- a/instances/atlas/commonCoordinateSpace/AMB-CCF.jsonld +++ /dev/null @@ -1,34 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/AMB-CCF", - "@type": "https://openminds.ebrains.eu/sands/CommonCoordinateSpace", - "abbreviation": "AMB CCF", - "author": null, - "custodian": null, - "description": "The 'Allen Mouse Brain Common Coordinate Framework' is a 3D reconstruction of an averaged adult mouse brain.", - "digitalIdentifier": null, - "fullName": "Allen Mouse Brain Common Coordinate Framework", - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v3-RAS" - }, - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v3" - }, - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v2" - }, - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v1" - } - ], - "homepage": "https://portal.brain-map.org/", - "howToCite": null, - "ontologyIdentifier": null, - "shortName": "Allen Mouse Brain CCF", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/musMusculus" - } -} diff --git a/instances/atlas/commonCoordinateSpace/BigBrain.jsonld b/instances/atlas/commonCoordinateSpace/BigBrain.jsonld deleted file mode 100644 index 6770d0691..000000000 --- a/instances/atlas/commonCoordinateSpace/BigBrain.jsonld +++ /dev/null @@ -1,25 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/BigBrain", - "@type": "https://openminds.ebrains.eu/sands/CommonCoordinateSpace", - "abbreviation": "BigBrain", - "author": null, - "custodian": null, - "description": "The 'BigBrain Whole-Brain Model' is a 3D reconstruction of a human brain in extremely high resolution.", - "digitalIdentifier": null, - "fullName": "BigBrain Whole-Brain Model", - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/BigBrain_2015" - } - ], - "homepage": "https://bigbrainproject.org/", - "howToCite": null, - "ontologyIdentifier": null, - "shortName": "BigBrain Model", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/homoSapiens" - } -} diff --git a/instances/atlas/commonCoordinateSpace/MEBRAINStemplate.jsonld b/instances/atlas/commonCoordinateSpace/MEBRAINStemplate.jsonld deleted file mode 100644 index 0f250b3f6..000000000 --- a/instances/atlas/commonCoordinateSpace/MEBRAINStemplate.jsonld +++ /dev/null @@ -1,25 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/MEBRAINStemplate", - "@type": "https://openminds.ebrains.eu/sands/CommonCoordinateSpace", - "abbreviation": "MEBRAINStemplate", - "author": null, - "custodian": null, - "description": "The 'MEBRAINS population-based monkey brain template' is a multi-subject based, multi-modal, volume and surface brain template for macaque monkeys.", - "digitalIdentifier": null, - "fullName": "MEBRAINS population-based monkey brain template", - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/MEBRAINStemplate_v1.0" - } - ], - "homepage": null, - "howToCite": null, - "ontologyIdentifier": null, - "shortName": "MEBRAINS brain template", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/macacaMulatta" - } -} diff --git a/instances/atlas/commonCoordinateSpace/MNI-Colin27.jsonld b/instances/atlas/commonCoordinateSpace/MNI-Colin27.jsonld deleted file mode 100644 index c8398d2e9..000000000 --- a/instances/atlas/commonCoordinateSpace/MNI-Colin27.jsonld +++ /dev/null @@ -1,28 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/MNI-Colin27", - "@type": "https://openminds.ebrains.eu/sands/CommonCoordinateSpace", - "abbreviation": "MNI-Colin27", - "author": null, - "custodian": null, - "description": "The 'MNI Colin 27 Average Brain Stereotaxic Registration Model' is a stereotaxic average of 27 T1-weighted MRI scans of the same individual. It was created at the Montreal Neurological Institute (MNI) in a two step process: (1) each of the 27 T1-weighted scans were registered to stereotaxic space using MRITOTAL (an automated volumetric registration procedure) and resampled onto a 1mm grid. All 27 scans were averaged together to create an initial average. (2) The initial average volume was used as a target for a second phase of registration where each original T1-weighted MRI was re-registered in stereotaxic space. This two-step procedure has the advantage of removing the small variance in intra-subject mapping in stereotaxic space associated with the use of a multi-subject average resulting in an average brain stereotaxic registration model with high signal-to-noise ratio and structure definition.", - "digitalIdentifier": null, - "fullName": "MNI Colin27 Average Brain Stereotaxic Registration Model", - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/MNIColin27_1998" - }, - { - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/MNIColin27_2008" - } - ], - "homepage": "https://www.mcgill.ca/bic/software/tools-data-analysis/anatomical-mri/atlases", - "howToCite": "Holmes CJ, Hoge R, Collins L, Woods R, Toga AW, and Evans AC; 'Enhancement of MR images using registration for signal averaging.'; J Comput Assist Tomogr; 1998 Mar-Apr; 22(2):324–33. [doi: 10.1097/00004728-199803000-00032](http://dx.doi.org/10.1097/00004728-199803000-00032)\nAubert-Broche B, Evans AC, and Collins DL; 'A new improved version of the realistic digital brain phantom'; NeuroImage; 2006 Aug;32(1):138–45. [doi: 10.1016/j.neuroimage.2006.03.052](https://doi.org/10.1016/j.neuroimage.2006.03.052)", - "ontologyIdentifier": null, - "shortName": "MNI Colin27 Average Brain", - "usedSpecies": { - "@id": "https://openminds.ebrains.eu/instances/species/homoSapiens" - } -} diff --git a/instances/atlas/commonCoordinateSpace/MNI-ICBM152.jsonld b/instances/atlas/commonCoordinateSpace/MNI-ICBM152.jsonld deleted file mode 100644 index ac72fbf1c..000000000 --- a/instances/atlas/commonCoordinateSpace/MNI-ICBM152.jsonld +++ /dev/null @@ -1,46 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/commonCoordinateSpace/MNI-ICBM152", - "@type": "https://openminds.ebrains.eu/sands/CommonCoordinateSpace", - "abbreviation": "ICBM152", - "author": null, - "custodian": null, - "description": "The 'MNI ICBM152 Average Brain Stereotaxic Registration Model' is an average of T1-weighted magnetic resonance imaging (MRI) scans from 152 normative young adults.", - 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"relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_MCIN.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_MCIN.jsonld deleted file mode 100644 index 3d3bfc9ca..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_MCIN.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_MCIN", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "MCIN", - "alternateName": [ - "CINM", - "Cingulum_Mid" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_limbicLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_MCIN" - } - ], - "lookupLabel": "AAL1_MCIN", - "name": "median cingulate and paracingulate gyri", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_O1.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_O1.jsonld deleted file mode 100644 index 0987b7a2f..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_O1.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_O1", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "O1", - "alternateName": [ - "O1", - "Occipital_Sup" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_occipitalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_O1" - } - ], - "lookupLabel": "AAL1_O1", - "name": "superior occipital gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_O2.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_O2.jsonld deleted file mode 100644 index 0d2245830..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_O2.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_O2", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "O2", - "alternateName": [ - "O2", - "Occipital_Mid" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_occipitalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_O2" - } - ], - "lookupLabel": "AAL1_O2", - "name": "middle occipital gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_O3.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_O3.jsonld deleted file mode 100644 index 8e977526f..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_O3.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_O3", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "O3", - "alternateName": [ - "O3", - "Occipital_Inf" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_occipitalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_O3" - } - ], - "lookupLabel": "AAL1_O3", - "name": "inferior occipital gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_OC.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_OC.jsonld deleted file mode 100644 index 0821f9eba..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_OC.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_OC", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "OC", - "alternateName": [ - "COB", - "Olfactory" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_frontalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_OC" - } - ], - "lookupLabel": "AAL1_OC", - "name": "olfactory cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_P1.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_P1.jsonld deleted file mode 100644 index 8943cabfb..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_P1.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_P1", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "P1", - "alternateName": [ - "P1", - "Parietal_Sup" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_parietalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_P1" - } - ], - "lookupLabel": "AAL1_P1", - "name": "superior parietal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_P2.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_P2.jsonld deleted file mode 100644 index b4731f705..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_P2.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_P2", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "P2", - "alternateName": [ - "P2", - "Parietal_Inf" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_parietalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_P2" - } - ], - "lookupLabel": "AAL1_P2", - "name": "inferior parietal, but supramarginal and\nangular gyri", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PAL.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PAL.jsonld deleted file mode 100644 index 2bd172c41..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PAL.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PAL", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PAL", - "alternateName": [ - "PALL", - "Pallidum" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_subcorticalGrayNuclei" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PAL" - } - ], - "lookupLabel": "AAL1_PAL", - "name": "lenticular nucleus, pallidum", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PCIN.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PCIN.jsonld deleted file mode 100644 index 15b5bd33a..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PCIN.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PCIN", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PCIN", - "alternateName": [ - "CIP", - "Cingulum_Post" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_limbicLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PCIN" - } - ], - "lookupLabel": "AAL1_PCIN", - "name": "posterior cingulate gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PCL.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PCL.jsonld deleted file mode 100644 index 479ba02d7..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PCL.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PCL", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PCL", - "alternateName": [ - "LPC", - "Paracentralobule" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_frontalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PCL" - } - ], - "lookupLabel": "AAL1_PCL", - "name": "paracentral lobule", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PHIP.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PHIP.jsonld deleted file mode 100644 index 6c33ee087..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PHIP.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PHIP", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PHIP", - "alternateName": [ - "PARA_HIPPO", - "ParaHippocampal" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_limbicLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PHIP" - } - ], - "lookupLabel": "AAL1_PHIP", - "name": "parahippocampal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_POST.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_POST.jsonld deleted file mode 100644 index 45712643d..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_POST.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_POST", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "POST", - "alternateName": [ - "PA", - "Postcentral" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_centralRegion" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_POST" - } - ], - "lookupLabel": "AAL1_POST", - "name": "postcentral gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PQ.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PQ.jsonld deleted file mode 100644 index aa507a2d8..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PQ.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PQ", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PQ", - "alternateName": [ - "PQ", - "Precuneus" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_parietalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PQ" - } - ], - "lookupLabel": "AAL1_PQ", - "name": "precuneus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PRE.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PRE.jsonld deleted file mode 100644 index 87e96b77b..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PRE.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PRE", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PRE", - "alternateName": [ - "FA", - "Precentral" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_centralRegion" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PRE" - } - ], - "lookupLabel": "AAL1_PRE", - "name": "precentral gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_PUT.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_PUT.jsonld deleted file mode 100644 index d1610796d..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_PUT.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_PUT", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "PUT", - "alternateName": [ - "NL", - "Putamen" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_subcorticalGrayNuclei" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_PUT" - } - ], - "lookupLabel": "AAL1_PUT", - "name": "lenticular nucleus, putamen", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_Q.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_Q.jsonld deleted file mode 100644 index 8d7492216..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_Q.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_Q", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "Q", - "alternateName": [ - "Q", - "Cuneus" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_occipitalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_Q" - } - ], - "lookupLabel": "AAL1_Q", - "name": "cuneus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_RO.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_RO.jsonld deleted file mode 100644 index bd7fa7278..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_RO.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_RO", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "RO", - "alternateName": [ - "OR", - "Rolandic_Oper" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_centralRegion" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_RO" - } - ], - "lookupLabel": "AAL1_RO", - "name": "rolandic operculum", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_SMA.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_SMA.jsonld deleted file mode 100644 index d01798663..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_SMA.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_SMA", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "SMA", - "alternateName": [ - "SMA", - "Supp_Motor_Area" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_frontalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_SMA" - } - ], - "lookupLabel": "AAL1_SMA", - "name": "supplementary motor area", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_SMG.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_SMG.jsonld deleted file mode 100644 index 7e019297c..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_SMG.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_SMG", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "SMG", - "alternateName": [ - "GSM", - "SupraMarginal" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_parietalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_SMG" - } - ], - "lookupLabel": "AAL1_SMG", - "name": "supramarginal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_T1.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_T1.jsonld deleted file mode 100644 index 64928110a..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_T1.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_T1", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "T1", - "alternateName": [ - "T1", - "Temporal_Sup" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_temporalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T1" - } - ], - "lookupLabel": "AAL1_T1", - "name": "superior temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_T1P.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_T1P.jsonld deleted file mode 100644 index 8fc266455..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_T1P.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_T1P", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "T1P", - "alternateName": [ - "T1A", - "Temporal_Pole_Sup" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_limbicLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T1P" - } - ], - "lookupLabel": "AAL1_T1P", - "name": "temporal pole: superior temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_T2.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_T2.jsonld deleted file mode 100644 index d340a9ddd..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_T2.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_T2", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "T2", - "alternateName": [ - "T2", - "Temporal_Mid" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_temporalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T2" - } - ], - "lookupLabel": "AAL1_T2", - "name": "middle temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_T2P.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_T2P.jsonld deleted file mode 100644 index fd8fbf079..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_T2P.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_T2P", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "T2P", - "alternateName": [ - "T2A", - "Temporal_Pole_Mid" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_limbicLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T2P" - } - ], - "lookupLabel": "AAL1_T2P", - "name": "temporal pole: middle temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_T3.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_T3.jsonld deleted file mode 100644 index a3e15565a..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_T3.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_T3", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "T3", - "alternateName": [ - "T3", - "Temporal_Inf" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_temporalLobe" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/AAL1_SPM12-v4_T3" - } - ], - "lookupLabel": "AAL1_T3", - "name": "inferior temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_THA.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_THA.jsonld deleted file mode 100644 index c17ce750b..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_THA.jsonld +++ /dev/null @@ -1,27 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_THA", - 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"@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_brain" - } - ], - "hasVersion": null, - "lookupLabel": "AAL1_occipitalLobe", - "name": "occipital lobe", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_parietalLobe.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_parietalLobe.jsonld deleted file mode 100644 index 827380882..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_parietalLobe.jsonld +++ /dev/null @@ -1,20 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_parietalLobe", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - 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} - ], - "hasVersion": null, - "lookupLabel": "AAL1_subcorticalGrayNuclei", - "name": "subcortical gray nuclei", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AAL1/AAL1_temporalLobe.jsonld b/instances/atlas/parcellationEntity/AAL1/AAL1_temporalLobe.jsonld deleted file mode 100644 index f37e42255..000000000 --- a/instances/atlas/parcellationEntity/AAL1/AAL1_temporalLobe.jsonld +++ /dev/null @@ -1,20 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_temporalLobe", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AAL1_brain" - } - ], - "hasVersion": null, - "lookupLabel": "AAL1_temporalLobe", - "name": "temporal lobe", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_accumbensArea.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_accumbensArea.jsonld deleted file mode 100644 index f05076903..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_accumbensArea.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_accumbensArea", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_accumbensArea", - "name": "accumbens area", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/nucleusAccumbens" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_amygdala.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_amygdala.jsonld deleted file mode 100644 index 5ef1ed15b..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_amygdala.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - 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"definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_caudate", - "name": "caudate", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/caudateNucleus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebellumCortex.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebellumCortex.jsonld deleted file mode 100644 index 1c94e5463..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebellumCortex.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_cerebellumCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_cerebellumCortex", - "name": "cerebellum cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/cerebellarCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebellumWhiteMatter.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebellumWhiteMatter.jsonld deleted file mode 100644 index 5bb94d71c..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebellumWhiteMatter.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_cerebellumWhiteMatter", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_cerebellumWhiteMatter", - "name": "cerebellum white matter", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/whiteMatterOfCerebellum" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebralCortex.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebralCortex.jsonld deleted file mode 100644 index 9bdd1b02a..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebralCortex.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_cerebralCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_cerebralCortex", - "name": "cerebral cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/cerebralCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebralWhiteMatter.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebralWhiteMatter.jsonld deleted file mode 100644 index 7f695ace2..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebralWhiteMatter.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_cerebralWhiteMatter", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_cerebralWhiteMatter", - "name": "cerebral white matter", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/cerebralHemisphereWhiteMatter" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebrospinalFluid.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebrospinalFluid.jsonld deleted file mode 100644 index b9e7f706c..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_cerebrospinalFluid.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_cerebrospinalFluid", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_cerebrospinalFluid", - "name": "cerebrospinal fluid", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/cerebrospinalFluid" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_fourthVentricle.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_fourthVentricle.jsonld deleted file mode 100644 index 76de7c1ac..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_fourthVentricle.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_fourthVentricle", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_fourthVentricle", - "name": "fourth ventricle", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/fourthVentricle" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_hippocampus.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_hippocampus.jsonld deleted file mode 100644 index 115df383f..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_hippocampus.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_hippocampus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_hippocampus", - "name": "hippocampus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/hippocampalFormation" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_inferiorLateralVentricle.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_inferiorLateralVentricle.jsonld deleted file mode 100644 index c297aa523..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_inferiorLateralVentricle.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_inferiorLateralVentricle", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_inferiorLateralVentricle", - "name": "inferior lateral ventricle", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/inferiorHornOfTheLateralVentricle" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_lateralVentricle.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_lateralVentricle.jsonld deleted file mode 100644 index d7a89854b..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_lateralVentricle.jsonld +++ /dev/null @@ -1,16 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_lateralVentricle", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_lateralVentricle", - "name": "lateral ventricle", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_lesion.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_lesion.jsonld deleted file mode 100644 index 580e1dd24..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_lesion.jsonld +++ /dev/null @@ -1,15 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_lesion", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_lesion", - "name": "lesion", - "ontologyIdentifier": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_pallidum.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_pallidum.jsonld deleted file mode 100644 index aec027d67..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_pallidum.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_pallidum", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_pallidum", - "name": "pallidum", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/pallidum" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_putamen.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_putamen.jsonld deleted file mode 100644 index b542d9ba0..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_putamen.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_putamen", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_putamen", - "name": "putamen", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/putamen" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_thalamus.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_thalamus.jsonld deleted file mode 100644 index 1ccbf5639..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_thalamus.jsonld +++ /dev/null @@ -1,16 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_thalamus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_thalamus", - "name": "thalamus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_thirdVentricle.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_thirdVentricle.jsonld deleted file mode 100644 index aa0d9cdde..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_thirdVentricle.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_thirdVentricle", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_thirdVentricle", - "name": "third ventricle", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/thirdVentricle" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_unknown.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_unknown.jsonld deleted file mode 100644 index f902762af..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_unknown.jsonld +++ /dev/null @@ -1,15 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_unknown", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_unknown", - "name": "unknown", - "ontologyIdentifier": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_ventralDiencephalon.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_ventralDiencephalon.jsonld deleted file mode 100644 index 19faa2584..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_ventralDiencephalon.jsonld +++ /dev/null @@ -1,15 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_ventralDiencephalon", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_ventralDiencephalon", - "name": "ventral diencephalon", - "ontologyIdentifier": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_vessel.jsonld b/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_vessel.jsonld deleted file mode 100644 index d2028bd88..000000000 --- a/instances/atlas/parcellationEntity/AsegAtlas/AsegAtlas_vessel.jsonld +++ /dev/null @@ -1,18 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/AsegAtlas_vessel", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "AsegAtlas_vessel", - "name": "vessel", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/vessel" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/BA-human/BA-human_BA1.jsonld b/instances/atlas/parcellationEntity/BA-human/BA-human_BA1.jsonld deleted file mode 100644 index aa1539e4b..000000000 --- a/instances/atlas/parcellationEntity/BA-human/BA-human_BA1.jsonld +++ /dev/null @@ -1,29 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_BA1", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "BA1", - "alternateName": [ - "Brodmann's area 1", - "human BA1", - "human Brodmann area 1", - "human Brodmann's area 1" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_cerebralCortex" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/BA-human_1909_BA1" - } - ], - "lookupLabel": "BA-human_BA1", - "name": "Brodmann area 1", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} diff --git a/instances/atlas/parcellationEntity/BA-human/BA-human_BA10.jsonld b/instances/atlas/parcellationEntity/BA-human/BA-human_BA10.jsonld deleted file mode 100644 index 3186d544a..000000000 --- a/instances/atlas/parcellationEntity/BA-human/BA-human_BA10.jsonld +++ /dev/null @@ -1,29 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_BA10", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "BA10", - "alternateName": [ - "Brodmann's area 10", - "human BA10", - "human Brodmann area 10", - "human Brodmann's area 10" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_cerebralCortex" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/BA-human_1909_BA10" - } - ], - "lookupLabel": "BA-human_BA10", - "name": "Brodmann area 10", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} diff --git a/instances/atlas/parcellationEntity/BA-human/BA-human_BA11.jsonld b/instances/atlas/parcellationEntity/BA-human/BA-human_BA11.jsonld deleted file mode 100644 index be7f0f97c..000000000 --- a/instances/atlas/parcellationEntity/BA-human/BA-human_BA11.jsonld +++ /dev/null @@ -1,29 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_BA11", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": "BA11", - "alternateName": [ - "Brodmann's area 11", - "human BA11", - "human Brodmann area 11", - "human Brodmann's area 11" - ], - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_cerebralCortex" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/BA-human_1909_BA11" - } - ], - "lookupLabel": "BA-human_BA11", - "name": "Brodmann area 11", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} diff --git a/instances/atlas/parcellationEntity/BA-human/BA-human_BA12.jsonld b/instances/atlas/parcellationEntity/BA-human/BA-human_BA12.jsonld deleted file mode 100644 index f089c3620..000000000 --- a/instances/atlas/parcellationEntity/BA-human/BA-human_BA12.jsonld +++ /dev/null @@ -1,29 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/BA-human_BA12", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - 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}, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_anteriorCingulateCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_cingulateCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_anteriorCingulateCortex", - "name": "anterior cingulate cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/anteriorCingulateCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_banksOfSuperiorTemporalSulcus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_banksOfSuperiorTemporalSulcus.jsonld deleted file mode 100644 index 9cd09603e..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_banksOfSuperiorTemporalSulcus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_banksOfSuperiorTemporalSulcus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_lateralAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_banksOfSuperiorTemporalSulcus", - "name": "banks of superior temporal sulcus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/banksOfSuperiorTemporalSulcus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_banksSuperiorTemporalSulcus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_banksSuperiorTemporalSulcus.jsonld deleted file mode 100644 index e45658a77..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_banksSuperiorTemporalSulcus.jsonld +++ /dev/null @@ -1,16 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_banksSuperiorTemporalSulcus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "DKA_banksSuperiorTemporalSulcus", - "name": "banks superior temporal sulcus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_caudalAnteriorCingulateCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_caudalAnteriorCingulateCortex.jsonld deleted file mode 100644 index 38c258d6d..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_caudalAnteriorCingulateCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_caudalAnteriorCingulateCortex", - 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], - "hasVersion": null, - "lookupLabel": "DKA_entorhinalCortex", - "name": "entorhinal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/entorhinalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_frontalLobe.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_frontalLobe.jsonld deleted file mode 100644 index c9eec6021..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_frontalLobe.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_cerebralCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_frontalLobe", - "name": "frontal lobe", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/frontalLobe" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_frontalPole.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_frontalPole.jsonld deleted file mode 100644 index 7c4558001..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_frontalPole.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalPole", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_frontalPole", - "name": "frontal pole", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/frontalPole" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_fusiformGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_fusiformGyrus.jsonld deleted file mode 100644 index 3389312db..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_fusiformGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_fusiformGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_medialAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_fusiformGyrus", - "name": "fusiform gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/fusiformGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_inferiorFrontalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_inferiorFrontalGyrus.jsonld deleted file mode 100644 index 82af949ea..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_inferiorFrontalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_inferiorFrontalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_inferiorFrontalGyrus", - "name": "inferior frontal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/inferiorFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_inferiorParietalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_inferiorParietalCortex.jsonld deleted file mode 100644 index d8e203b41..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_inferiorParietalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_inferiorParietalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parietalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_inferiorParietalCortex", - "name": "inferior parietal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/inferiorParietalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_inferiorTemporalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_inferiorTemporalGyrus.jsonld deleted file mode 100644 index 6415ecbc8..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_inferiorTemporalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_inferiorTemporalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_lateralAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_inferiorTemporalGyrus", - "name": "inferior temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/inferiorTemporalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_insula.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_insula.jsonld deleted file mode 100644 index 85e801e35..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_insula.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_insula", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_cerebralCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_insula", - "name": "insula", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/insula" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_isthmusOfCingulateCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_isthmusOfCingulateCortex.jsonld deleted file mode 100644 index 25f757536..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_isthmusOfCingulateCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_isthmusOfCingulateCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_occipitalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_isthmusOfCingulateCortex", - "name": "isthmus of cingulate cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/isthmusOfCingulateGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_lateralOccipitalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_lateralOccipitalCortex.jsonld deleted file mode 100644 index bc2cadc29..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_lateralOccipitalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_lateralOccipitalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_occipitalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_lateralOccipitalCortex", - "name": "lateral occipital cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/lateralOccipitalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_lateralOrbitalFrontalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_lateralOrbitalFrontalCortex.jsonld deleted file mode 100644 index e0fa26446..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_lateralOrbitalFrontalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_lateralOrbitalFrontalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_orbitofrontalCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_lateralOrbitalFrontalCortex", - "name": "lateral orbitofrontal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/lateralOrbitalFrontalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_lingualGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_lingualGyrus.jsonld deleted file mode 100644 index f9ec0855b..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_lingualGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_lingualGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_occipitalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_lingualGyrus", - "name": "lingual gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/lingualGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_medialOrbitalFrontalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_medialOrbitalFrontalCortex.jsonld deleted file mode 100644 index 0142489d7..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_medialOrbitalFrontalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_medialOrbitalFrontalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_orbitofrontalCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_medialOrbitalFrontalCortex", - "name": "medial orbitofrontal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/medialOrbitalFrontalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_middleFrontalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_middleFrontalGyrus.jsonld deleted file mode 100644 index d876a9dca..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_middleFrontalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_middleFrontalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_middleFrontalGyrus", - "name": "middle frontal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/middleFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_middleTemporalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_middleTemporalGyrus.jsonld deleted file mode 100644 index c550a2bb7..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_middleTemporalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_middleTemporalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_lateralAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_middleTemporalGyrus", - "name": "middle temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/middleTemporalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_occipitalLobe.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_occipitalLobe.jsonld deleted file mode 100644 index 348798ad8..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_occipitalLobe.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_occipitalLobe", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_cerebralCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_occipitalLobe", - "name": "occipital lobe", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/occipitalLobe" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_orbitofrontalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_orbitofrontalCortex.jsonld deleted file mode 100644 index ceb2f1cf1..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_orbitofrontalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_orbitofrontalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_orbitofrontalCortex", - "name": "orbitofrontal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/orbitofrontalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_paracentralLobule.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_paracentralLobule.jsonld deleted file mode 100644 index 2fb6354ff..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_paracentralLobule.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_paracentralLobule", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_paracentralLobule", - "name": "paracentral lobule", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/paracentralLobule" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_parahippocampalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_parahippocampalGyrus.jsonld deleted file mode 100644 index d25be7087..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_parahippocampalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parahippocampalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_medialAspect" - } - 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"lookupLabel": "DKA_parietalLobe", - "name": "parietal lobe", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/parietalLobe" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_parsOpercularis.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_parsOpercularis.jsonld deleted file mode 100644 index 0f930a67f..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_parsOpercularis.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parsOpercularis", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_inferiorFrontalGyrus" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_parsOpercularis", - "name": "pars opercularis", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/opercularPartOfInferiorFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_parsOrbitalis.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_parsOrbitalis.jsonld deleted file mode 100644 index 07de4f4d9..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_parsOrbitalis.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parsOrbitalis", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_inferiorFrontalGyrus" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_parsOrbitalis", - "name": "pars orbitalis", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/orbitalPartOfInferiorFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_parsTriangularis.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_parsTriangularis.jsonld deleted file mode 100644 index 05927acbc..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_parsTriangularis.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parsTriangularis", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_inferiorFrontalGyrus" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_parsTriangularis", - "name": "pars triangularis", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/triangularPartOfInferiorFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_pericalcarineCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_pericalcarineCortex.jsonld deleted file mode 100644 index 7aa875427..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_pericalcarineCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_pericalcarineCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_occipitalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_pericalcarineCortex", - "name": "pericalcarine cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/pericalcarineCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_postcentralGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_postcentralGyrus.jsonld deleted file mode 100644 index 47989b699..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_postcentralGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_postcentralGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parietalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_postcentralGyrus", - "name": "postcentral gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/postcentralGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_posteriorCingulateCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_posteriorCingulateCortex.jsonld deleted file mode 100644 index fb3428c5a..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_posteriorCingulateCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_posteriorCingulateCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_occipitalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_posteriorCingulateCortex", - "name": "posterior cingulate cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/posteriorCingulateCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_precentralGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_precentralGyrus.jsonld deleted file mode 100644 index 4669ea36e..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_precentralGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_precentralGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_precentralGyrus", - "name": "precentral gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/precentralGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_precuneusCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_precuneusCortex.jsonld deleted file mode 100644 index 4a2f2974b..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_precuneusCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_precuneusCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parietalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_precuneusCortex", - "name": "precuneus cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/precuneusCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_rostralAnteriorCingulateCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_rostralAnteriorCingulateCortex.jsonld deleted file mode 100644 index 5c40d02eb..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_rostralAnteriorCingulateCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_rostralAnteriorCingulateCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_anteriorCingulateCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_rostralAnteriorCingulateCortex", - "name": "rostral anterior cingulate cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/rostralAnteriorCingulateCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_rostralMiddleFrontalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_rostralMiddleFrontalGyrus.jsonld deleted file mode 100644 index f5e35fda0..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_rostralMiddleFrontalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_rostralMiddleFrontalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_middleFrontalGyrus" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_rostralMiddleFrontalGyrus", - "name": "rostral middle frontal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/rostralMiddleFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_superiorFrontalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_superiorFrontalGyrus.jsonld deleted file mode 100644 index 38aaddb98..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_superiorFrontalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_superiorFrontalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_frontalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_superiorFrontalGyrus", - "name": "superior frontal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/superiorFrontalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_superiorParietalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_superiorParietalCortex.jsonld deleted file mode 100644 index 47391e288..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_superiorParietalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_superiorParietalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parietalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_superiorParietalCortex", - "name": "superior parietal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/superiorParietalCortex" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_superiorTemporalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_superiorTemporalGyrus.jsonld deleted file mode 100644 index 35775420e..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_superiorTemporalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_superiorTemporalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_lateralAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_superiorTemporalGyrus", - "name": "superior temporal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/superiorTemporalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_supramarginalGyrus.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_supramarginalGyrus.jsonld deleted file mode 100644 index ea8a550dd..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_supramarginalGyrus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_supramarginalGyrus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_parietalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_supramarginalGyrus", - "name": "supramarginal gyrus", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/supramarginalGyrus" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe.jsonld deleted file mode 100644 index bb4fdd904..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_cerebralCortex" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_temporalLobe", - "name": "temporal lobe", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/temporalLobe" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe_lateralAspect.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe_lateralAspect.jsonld deleted file mode 100644 index 6e455412a..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe_lateralAspect.jsonld +++ /dev/null @@ -1,20 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_lateralAspect", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_temporalLobe_lateralAspect", - "name": "temporal lobe - lateral aspect", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe_medialAspect.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe_medialAspect.jsonld deleted file mode 100644 index e0e37e031..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_temporalLobe_medialAspect.jsonld +++ /dev/null @@ -1,20 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_medialAspect", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_temporalLobe_medialAspect", - "name": "temporal lobe - medial aspect", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_temporalPole.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_temporalPole.jsonld deleted file mode 100644 index 460a2eb47..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_temporalPole.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalPole", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_medialAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_temporalPole", - "name": "temporal pole", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/temporalPole" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DKA/DKA_transverseTemporalCortex.jsonld b/instances/atlas/parcellationEntity/DKA/DKA_transverseTemporalCortex.jsonld deleted file mode 100644 index fdddfc54a..000000000 --- a/instances/atlas/parcellationEntity/DKA/DKA_transverseTemporalCortex.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_transverseTemporalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DKA_temporalLobe_lateralAspect" - } - ], - "hasVersion": null, - "lookupLabel": "DKA_transverseTemporalCortex", - "name": "transverse temporal cortex", - "ontologyIdentifier": null, - "relatedUBERONTerm": { - "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/transverseGyrusOfHeschl" - } -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DWMA/DWMA_anteriorSegementOfArcuateFasciculus.jsonld b/instances/atlas/parcellationEntity/DWMA/DWMA_anteriorSegementOfArcuateFasciculus.jsonld deleted file mode 100644 index 38e73fc5c..000000000 --- a/instances/atlas/parcellationEntity/DWMA/DWMA_anteriorSegementOfArcuateFasciculus.jsonld +++ /dev/null @@ -1,24 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DWMA_anteriorSegementOfArcuateFasciculus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DWMA_arcuateFasciculus" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/DWMA_2018_anteriorSegementOfArcuateFasciculus" - } - ], - "lookupLabel": "DWMA_anteriorSegementOfArcuateFasciculus", - "name": "anterior segement of arcuate fasciculus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DWMA/DWMA_arcuateFasciculus.jsonld b/instances/atlas/parcellationEntity/DWMA/DWMA_arcuateFasciculus.jsonld deleted file mode 100644 index 09bae259d..000000000 --- a/instances/atlas/parcellationEntity/DWMA/DWMA_arcuateFasciculus.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DWMA_arcuateFasciculus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DWMA_deepWhiteMatter" - } - ], - "hasVersion": null, - "lookupLabel": "DWMA_arcuateFasciculus", - 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}, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DWMA_longCingulateFibres", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": null, - "definition": null, - "hasParent": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/DWMA_cingulum" - } - ], - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/DWMA_2018_longCingulateFibres" - } - ], - "lookupLabel": "DWMA_longCingulateFibres", - "name": "long cingulate fibres", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/DWMA/DWMA_posteriorSegementOfArcuateFasciculus.jsonld b/instances/atlas/parcellationEntity/DWMA/DWMA_posteriorSegementOfArcuateFasciculus.jsonld deleted file mode 100644 index 5546650f6..000000000 --- a/instances/atlas/parcellationEntity/DWMA/DWMA_posteriorSegementOfArcuateFasciculus.jsonld +++ /dev/null @@ -1,24 +0,0 @@ -{ - 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"abbreviation": null, - "alternateName": [ - "LamP" - ], - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "WHSSDatlas_laminatedPallium", - "name": "laminated pallium", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralEntorhinalCortex.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralEntorhinalCortex.jsonld deleted file mode 100644 index 251144649..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralEntorhinalCortex.jsonld +++ /dev/null @@ -1,31 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralEntorhinalCortex", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "LEC" - ], - "definition": null, - "hasParent": null, - 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"@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "ll" - ], - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "WHSSDatlas_lateralLemniscus", - "name": "lateral lemniscus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusCommissure.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusCommissure.jsonld deleted file mode 100644 index 2a753c6d4..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusCommissure.jsonld +++ /dev/null @@ -1,28 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusCommissure", - 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"@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusDorsalNucleus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "DLL" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3_lateralLemniscusDorsalNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3.01_lateralLemniscusDorsalNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_lateralLemniscusDorsalNucleus" - } - ], - "lookupLabel": "WHSSDatlas_lateralLemniscusDorsalNucleus", - "name": "lateral lemniscus, dorsal nucleus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusIntermediateNucleus.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusIntermediateNucleus.jsonld deleted file mode 100644 index 98e149d2e..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusIntermediateNucleus.jsonld +++ /dev/null @@ -1,28 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusIntermediateNucleus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "ILL" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3_lateralLemniscusIntermediateNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3.01_lateralLemniscusIntermediateNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_lateralLemniscusIntermediateNucleus" - } - ], - "lookupLabel": "WHSSDatlas_lateralLemniscusIntermediateNucleus", - "name": "lateral lemniscus, intermediate nucleus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusUnspecified.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusUnspecified.jsonld deleted file mode 100644 index a17ab5767..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusUnspecified.jsonld +++ /dev/null @@ -1,28 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusUnspecified", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "ll-u" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3_lateralLemniscus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3.01_lateralLemniscus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_lateralLemniscusUnspecified" - } - ], - "lookupLabel": "WHSSDatlas_lateralLemniscusUnspecified", - "name": "lateral lemniscus, unspecified", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusVentralNucleus.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusVentralNucleus.jsonld deleted file mode 100644 index b47021269..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralLemniscusVentralNucleus.jsonld +++ /dev/null @@ -1,28 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralLemniscusVentralNucleus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "VLL" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3_lateralLemniscusVentralNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3.01_lateralLemniscusVentralNucleus" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_lateralLemniscusVentralNucleus" - } - ], - "lookupLabel": "WHSSDatlas_lateralLemniscusVentralNucleus", - "name": "lateral lemniscus, ventral nucleus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralOlfactoryTract.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralOlfactoryTract.jsonld deleted file mode 100644 index 7ae609ac9..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralOlfactoryTract.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_lateralOlfactoryTract", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "lot" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_lateralOlfactoryTract" - } - ], - "lookupLabel": "WHSSDatlas_lateralOlfactoryTract", - "name": "lateral olfactory tract", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralOrbitalArea.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralOrbitalArea.jsonld deleted file mode 100644 index 74e61185e..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_lateralOrbitalArea.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - 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"@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "OB", - "olfactory system", - "olfactory areas" - ], - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "WHSSDatlas_olfactoryBulb", - "name": "olfactory bulb", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_olfactoryBulbUnspecified.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_olfactoryBulbUnspecified.jsonld deleted file mode 100644 index aad37e6f2..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_olfactoryBulbUnspecified.jsonld +++ /dev/null @@ -1,34 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_olfactoryBulbUnspecified", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - 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}, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_opticFiberSystemAndSupraopticDecussation", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "ofs" - ], - "definition": null, - "hasParent": null, - "hasVersion": null, - "lookupLabel": "WHSSDatlas_opticFiberSystemAndSupraopticDecussation", - "name": "optic fiber system and supraoptic decussation", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_opticNerve.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_opticNerve.jsonld deleted file mode 100644 index 1a224c5d9..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_opticNerve.jsonld +++ /dev/null @@ -1,34 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_opticNerve", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "2n" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_opticNerve" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v2_opticNerve" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3_opticNerve" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v3.01_opticNerve" - }, - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_opticNerve" - } - ], - "lookupLabel": "WHSSDatlas_opticNerve", - "name": "optic nerve", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_opticTractAndOpticChiasm.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_opticTractAndOpticChiasm.jsonld deleted file mode 100644 index a23e6ef79..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_opticTractAndOpticChiasm.jsonld +++ /dev/null @@ -1,34 +0,0 @@ -{ - 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"@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_substantiaNigraCompactPart", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "SN-c" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v4_substantiaNigraCompactPart" - } - ], - "lookupLabel": "WHSSDatlas_substantiaNigraCompactPart", - "name": "substantia nigra, compact part", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_substantiaNigraLateralPart.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_substantiaNigraLateralPart.jsonld deleted file mode 100644 index f8f1833b9..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_substantiaNigraLateralPart.jsonld +++ /dev/null @@ -1,22 +0,0 @@ -{ - 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"name": "subthalamic nucleus", - "ontologyIdentifier": null, - "relatedUBERONTerm": null -} \ No newline at end of file diff --git a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_superficialGrayLayerOfTheSuperiorColliculus.jsonld b/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_superficialGrayLayerOfTheSuperiorColliculus.jsonld deleted file mode 100644 index 9bf84b719..000000000 --- a/instances/atlas/parcellationEntity/WHSSDatlas/WHSSDatlas_superficialGrayLayerOfTheSuperiorColliculus.jsonld +++ /dev/null @@ -1,34 +0,0 @@ -{ - "@context": { - "@vocab": "https://openminds.ebrains.eu/vocab/" - }, - "@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_superficialGrayLayerOfTheSuperiorColliculus", - "@type": "https://openminds.ebrains.eu/sands/ParcellationEntity", - "abbreviation": null, - "alternateName": [ - "SuG" - ], - "definition": null, - "hasParent": null, - "hasVersion": [ - { - "@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_superficialGrayLayerOfTheSuperiorColliculus" - 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