Knowledge - Notion - When synced files get deleted from notion, they continue to be present in the agent's knowledge files.

[sangee2004]

Steps to reproduce the problem:

1. Create an Agent with knowledge files from notion
2. Once the selected files have been ingested successfully, delete one of the synced files from Notion UI.
3. Use "Sync Files" option.

Notice that even after sync is completed successfully , we still see the delete file still being present in the knowledge file list.
I am also able to get chat and get responses relating to the knowledge file.

Expected Behavior:
Deleted files should be deleted from knowledge files on sync.

Errors seen in the server logs when syncing:

INFO[1020] Handling request: method POST, path /run      id=3aef267a-186c-4f7c-aafc-6312ada83364
ERRO[1020] sql query error                               affected=0 caller="/Users/sangeethahariharan/go/pkg/mod/github.com/acorn-io/[email protected]/pkg/db/db.go:686" elapsed="119.958µs" error="UNIQUE constraint failed: thread.previous" sql="INSERT INTO `thread` (`kind`,`version`,`api_group`,`name`,`namespace`,`uid`,`generation`,`previous`,`create`,`created`,`updated`,`deleted`,`removed`,`garbage`,`latest`,`metadata`,`data`,`status`,`partition_id`) VALUES (\"Thread\",\"v1\",\"otto.gptscript.ai\",\"t1b52vg\",\"default\",\"749f70c8-47f4-479f-af3a-788e7efe443e\",1,1685,false,\"2024-10-16 11:24:23.698\",\"2024-10-16 11:24:23.733\",NULL,NULL,false,true,\"{\"\"generateName\"\":\"\"t1\"\",\"\"managedFields\"\":[{\"\"apiVersion\"\":\"\"otto.gptscript.ai/v1\"\",\"\"fieldsType\"\":\"\"FieldsV1\"\",\"\"fieldsV1\"\":{\"\"f:metadata\"\":{\"\"f:generateName\"\":{}},\"\"f:spec\"\":{\"\"f:remoteKnowledgeSourceName\"\":{},\"\"f:workspaceID\"\":{}}},\"\"manager\"\":\"\"otto\"\",\"\"operation\"\":\"\"Update\"\",\"\"time\"\":\"\"2024-10-16T18:24:23Z\"\"}]}\",\"{\"\"spec\"\":{\"\"manifest\"\":{},\"\"remoteKnowledgeSourceName\"\":\"\"rks1sd6jx\"\",\"\"workspaceID\"\":\"\"directory:///Users/sangeethahariharan/Library/Application Support/otto/workspaces/5cd2aa7a-5b40-4ee0-a81d-f81c055bca90\"\"}}\",\"{\"\"knowledgeSetNames\"\":[\"\"ks1bf7fw\"\"]}\",\"\") RETURNING `id`"
@notionhq/client warn: request fail {
  code: 'object_not_found',
  message: 'Could not find block with ID: 121b081d-a8af-80cc-8312-ff16a055141f. Make sure the relevant pages and databases are shared with your integration.'
}
APIResponseError: Could not find block with ID: 121b081d-a8af-80cc-8312-ff16a055141f. Make sure the relevant pages and databases are shared with your integration.
    at buildRequestError (/Users/sangeethahariharan/Library/Caches/gptscript/repos/cd5fee69c2f7eb25246c622da51314736f832f09/knowledge/data-sources/notion/tool.gpt/node20/knowledge/data-sources/notion/node_modules/@notionhq/client/src/errors.ts:240:12)
    at Client.request (/Users/sangeethahariharan/Library/Caches/gptscript/repos/cd5fee69c2f7eb25246c622da51314736f832f09/knowledge/data-sources/notion/tool.gpt/node20/knowledge/data-sources/notion/node_modules/@notionhq/client/src/Client.ts:184:32)
    at processTicksAndRejections (node:internal/process/task_queues:95:5) {
  code: 'object_not_found',
  status: 404,
  headers: Headers {
    [Symbol(map)]: [Object: null prototype] {
      date: [Array],
      'content-type': [Array],
      'transfer-encoding': [Array],
      connection: [Array],
      'cf-ray': [Array],
      'cf-cache-status': [Array],
      etag: [Array],
      'strict-transport-security': [Array],
      vary: [Array],
      'content-security-policy': [Array],
      'referrer-policy': [Array],
      'x-content-type-options': [Array],
      'x-dns-prefetch-control': [Array],
      'x-download-options': [Array],
      'x-frame-options': [Array],
      'x-notion-request-id': [Array],
      'x-permitted-cross-domain-policies': [Array],
      'x-xss-protection': [Array],
      'set-cookie': [Array],
      server: [Array],
      'content-encoding': [Array]
    }
  },
  body: '{"object":"error","status":404,"code":"object_not_found","message":"Could not find block with ID: 121b081d-a8af-80cc-8312-ff16a055141f. Make sure the relevant pages and databases are shared with your integration.","request_id":"1ac7a9ce-38ad-4ecc-b577-17c4dce9ea83"}'
}

[sangee2004]

This issue is not see anymore when testing with latest version.