diff --git a/src/curation/upheno-fillers/ddpheno/abnormalAbsenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/ddpheno/abnormalAbsenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..85454179 --- /dev/null +++ b/src/curation/upheno-fillers/ddpheno/abnormalAbsenceOfBiologicalProcess.tsv @@ -0,0 +1,108 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_1902605 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0006412 http://purl.obolibrary.org/obo/UPHENO_0083294 +http://purl.obolibrary.org/obo/GO_1903013 http://purl.obolibrary.org/obo/UPHENO_0083295 +http://purl.obolibrary.org/obo/GO_0042554 http://purl.obolibrary.org/obo/UPHENO_0083296 +http://purl.obolibrary.org/obo/GO_0016339 http://purl.obolibrary.org/obo/UPHENO_0083298 +http://purl.obolibrary.org/obo/GO_0031150 http://purl.obolibrary.org/obo/UPHENO_0083299 +http://purl.obolibrary.org/obo/GO_1905037 http://purl.obolibrary.org/obo/UPHENO_0083300 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b/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedResistanceOfWholeOrganismToChemicalEntity.tsv @@ -0,0 +1,3 @@ +chemical_entity defined_class +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/UPHENO_0076332 +http://purl.obolibrary.org/obo/CHEBI_16240 http://purl.obolibrary.org/obo/UPHENO_0076502 diff --git a/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedResistanceOfWholeOrganismToEntity.tsv b/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedResistanceOfWholeOrganismToEntity.tsv new file mode 100644 index 00000000..7ea45ff7 --- /dev/null +++ b/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedResistanceOfWholeOrganismToEntity.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/CHEBI_16240 http://purl.obolibrary.org/obo/UPHENO_0076260 +http://purl.obolibrary.org/obo/BFO_0000001 http://purl.obolibrary.org/obo/UPHENO_0081418 diff --git a/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..a134431c --- /dev/null +++ b/src/curation/upheno-fillers/ddpheno/abnormallyDecreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,10 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0068971 +http://purl.obolibrary.org/obo/GO_0032195 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0000331 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005768 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0000235 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005764 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0031143 http://purl.obolibrary.org/obo/UPHENO_0084757 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+http://purl.obolibrary.org/obo/GO_0090383 http://purl.obolibrary.org/obo/UPHENO_0083029 diff --git a/src/curation/upheno-fillers/dpo/abnormalAbsenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/dpo/abnormalAbsenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..e4061324 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalAbsenceOfBiologicalProcess.tsv @@ -0,0 +1,4 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0034024 +http://purl.obolibrary.org/obo/GO_0060361 http://purl.obolibrary.org/obo/UPHENO_0078503 +http://purl.obolibrary.org/obo/GO_0050879 http://purl.obolibrary.org/obo/UPHENO_0078504 diff --git a/src/curation/upheno-fillers/dpo/abnormalAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormalAnatomicalEntity.tsv new file mode 100644 index 00000000..ebe14380 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0002536 diff --git a/src/curation/upheno-fillers/dpo/abnormalBiologicalProcess.tsv b/src/curation/upheno-fillers/dpo/abnormalBiologicalProcess.tsv new file mode 100644 index 00000000..a70f8bfc --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalBiologicalProcess.tsv @@ -0,0 +1,71 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0007625 http://purl.obolibrary.org/obo/UPHENO_0078680 +http://purl.obolibrary.org/obo/GO_0000278 http://purl.obolibrary.org/obo/UPHENO_0050313 +http://purl.obolibrary.org/obo/GO_0050975 http://purl.obolibrary.org/obo/UPHENO_0050208 +http://purl.obolibrary.org/obo/GO_0007623 http://purl.obolibrary.org/obo/UPHENO_0049593 +http://purl.obolibrary.org/obo/GO_0007628 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0006979 http://purl.obolibrary.org/obo/UPHENO_0049674 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+http://purl.obolibrary.org/obo/GO_0007631 http://purl.obolibrary.org/obo/UPHENO_0049664 +http://purl.obolibrary.org/obo/GO_0007632 http://purl.obolibrary.org/obo/UPHENO_0050596 +http://purl.obolibrary.org/obo/GO_0007113 http://purl.obolibrary.org/obo/UPHENO_0078692 +http://purl.obolibrary.org/obo/GO_0007630 http://purl.obolibrary.org/obo/UPHENO_0078693 +http://purl.obolibrary.org/obo/GO_0045433 http://purl.obolibrary.org/obo/UPHENO_0078694 +http://purl.obolibrary.org/obo/GO_0035187 http://purl.obolibrary.org/obo/UPHENO_0078695 +http://purl.obolibrary.org/obo/GO_0001736 http://purl.obolibrary.org/obo/UPHENO_0078678 +http://purl.obolibrary.org/obo/GO_0055116 http://purl.obolibrary.org/obo/UPHENO_0078696 +http://purl.obolibrary.org/obo/GO_0055115 http://purl.obolibrary.org/obo/UPHENO_0050136 diff --git a/src/curation/upheno-fillers/dpo/abnormalNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormalNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..439cb46b --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalNumberOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011498 +http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0077426 diff --git a/src/curation/upheno-fillers/dpo/abnormalPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormalPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..9043ea08 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0066794 diff --git a/src/curation/upheno-fillers/dpo/abnormalShapeOfAnatomicalEntityByShapeType.tsv b/src/curation/upheno-fillers/dpo/abnormalShapeOfAnatomicalEntityByShapeType.tsv new file mode 100644 index 00000000..110d211f --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalShapeOfAnatomicalEntityByShapeType.tsv @@ -0,0 +1 @@ +entity shape defined_class diff --git a/src/curation/upheno-fillers/dpo/abnormalShapeOfPhysicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormalShapeOfPhysicalEntity.tsv new file mode 100644 index 00000000..458b13e3 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalShapeOfPhysicalEntity.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/BFO_0000002 http://purl.obolibrary.org/obo/UPHENO_0080300 +http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0077197 diff --git a/src/curation/upheno-fillers/dpo/abnormalSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormalSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..153d92c3 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalSizeOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0077801 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0075195 diff --git a/src/curation/upheno-fillers/dpo/abnormalWeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormalWeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..e1eff1cc --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormalWeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0010763 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedMassOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedMassOfAnatomicalEntity.tsv new file mode 100644 index 00000000..a9eec4ec --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedMassOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082761 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8c1f8569 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063722 +http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0076675 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..a43d4da1 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,4 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008219 http://purl.obolibrary.org/obo/UPHENO_0082838 +http://purl.obolibrary.org/obo/GO_0051301 http://purl.obolibrary.org/obo/UPHENO_0077434 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0077429 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedRateOfBiologicalProcess.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedRateOfBiologicalProcess.tsv new file mode 100644 index 00000000..afc1fbb1 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedRateOfBiologicalProcess.tsv @@ -0,0 +1,20 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0007635 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007625 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007628 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007617 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007629 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007626 http://purl.obolibrary.org/obo/UPHENO_0005678 +http://purl.obolibrary.org/obo/GO_0007637 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007155 http://purl.obolibrary.org/obo/UPHENO_0080289 +http://purl.obolibrary.org/obo/GO_0007620 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007631 http://purl.obolibrary.org/obo/UPHENO_0005673 +http://purl.obolibrary.org/obo/GO_0042331 http://purl.obolibrary.org/obo/UPHENO_0080290 +http://purl.obolibrary.org/obo/GO_0008344 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0007630 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0008345 http://purl.obolibrary.org/obo/UPHENO_0005781 +http://purl.obolibrary.org/obo/GO_0050879 http://purl.obolibrary.org/obo/UPHENO_0005521 +http://purl.obolibrary.org/obo/GO_0016049 http://purl.obolibrary.org/obo/UPHENO_0076903 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0005433 +http://purl.obolibrary.org/obo/GO_0007619 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0030431 http://purl.obolibrary.org/obo/UPHENO_0005595 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedResistanceOfWholeOrganismToChemicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedResistanceOfWholeOrganismToChemicalEntity.tsv new file mode 100644 index 00000000..43396654 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedResistanceOfWholeOrganismToChemicalEntity.tsv @@ -0,0 +1 @@ +chemical_entity defined_class diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedResistanceOfWholeOrganismToEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedResistanceOfWholeOrganismToEntity.tsv new file mode 100644 index 00000000..f8df8dee --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedResistanceOfWholeOrganismToEntity.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/BFO_0000001 http://purl.obolibrary.org/obo/UPHENO_0081418 +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/UPHENO_0076053 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..e00b06a8 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0068971 +http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0080059 diff --git a/src/curation/upheno-fillers/dpo/abnormallyDecreasedWeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyDecreasedWeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..3234483e --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyDecreasedWeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054261 diff --git a/src/curation/upheno-fillers/dpo/abnormallyIncreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/dpo/abnormallyIncreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..ea1ba015 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyIncreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0014240 +http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0079539 diff --git a/src/curation/upheno-fillers/dpo/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/dpo/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..d5d0f575 --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,4 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008219 http://purl.obolibrary.org/obo/UPHENO_0079408 +http://purl.obolibrary.org/obo/GO_0051301 http://purl.obolibrary.org/obo/UPHENO_0079253 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0079251 diff --git a/src/curation/upheno-fillers/dpo/abnormallyIncreasedRateOfBiologicalProcess.tsv b/src/curation/upheno-fillers/dpo/abnormallyIncreasedRateOfBiologicalProcess.tsv new file mode 100644 index 00000000..7ee5807f --- /dev/null +++ b/src/curation/upheno-fillers/dpo/abnormallyIncreasedRateOfBiologicalProcess.tsv @@ -0,0 +1,20 @@ +biological_process 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http://purl.obolibrary.org/obo/UPHENO_0079846 diff --git a/src/curation/upheno-fillers/hp/abnormalBiologicalProcess.tsv b/src/curation/upheno-fillers/hp/abnormalBiologicalProcess.tsv new file mode 100644 index 00000000..b2b1a271 --- /dev/null +++ b/src/curation/upheno-fillers/hp/abnormalBiologicalProcess.tsv @@ -0,0 +1,86 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0032602 http://purl.obolibrary.org/obo/UPHENO_0080590 +http://purl.obolibrary.org/obo/NBO_0000446 http://purl.obolibrary.org/obo/UPHENO_0078579 +http://purl.obolibrary.org/obo/NBO_0000403 http://purl.obolibrary.org/obo/UPHENO_0078622 +http://purl.obolibrary.org/obo/NBO_0000128 http://purl.obolibrary.org/obo/UPHENO_0080591 +http://purl.obolibrary.org/obo/GO_0006776 http://purl.obolibrary.org/obo/UPHENO_0078581 +http://purl.obolibrary.org/obo/NBO_0000444 http://purl.obolibrary.org/obo/UPHENO_0080581 +http://purl.obolibrary.org/obo/GO_0001764 http://purl.obolibrary.org/obo/UPHENO_0049852 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a/src/curation/upheno-fillers/hp/abnormalCellularComponent.tsv b/src/curation/upheno-fillers/hp/abnormalCellularComponent.tsv new file mode 100644 index 00000000..1868d8cc --- /dev/null +++ b/src/curation/upheno-fillers/hp/abnormalCellularComponent.tsv @@ -0,0 +1,3 @@ +cellular_component defined_class +http://purl.obolibrary.org/obo/GO_0005739 http://purl.obolibrary.org/obo/UPHENO_0082544 +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0006889 diff --git a/src/curation/upheno-fillers/hp/abnormalColorOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/hp/abnormalColorOfAnatomicalEntity.tsv new file mode 100644 index 00000000..4e4cefca --- /dev/null +++ b/src/curation/upheno-fillers/hp/abnormalColorOfAnatomicalEntity.tsv @@ -0,0 +1,4 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080210 +http://purl.obolibrary.org/obo/UBERON_0001091 http://purl.obolibrary.org/obo/UPHENO_0080215 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index 00000000..a60f65c1 --- /dev/null +++ b/src/curation/upheno-fillers/hp/abnormallyCurvedAnatomicalEntityByOrientation.tsv @@ -0,0 +1,45 @@ +anatomical_entity orientation defined_class +http://purl.obolibrary.org/obo/UBERON_0000979 http://purl.obolibrary.org/obo/PATO_0001592 http://purl.obolibrary.org/obo/UPHENO_0031090 +http://purl.obolibrary.org/obo/UBERON_0000976 http://purl.obolibrary.org/obo/PATO_0001592 http://purl.obolibrary.org/obo/UPHENO_0031093 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000406 http://purl.obolibrary.org/obo/UPHENO_0031193 +http://purl.obolibrary.org/obo/UBERON_0035133 http://purl.obolibrary.org/obo/PATO_0001592 http://purl.obolibrary.org/obo/UPHENO_0031307 +http://purl.obolibrary.org/obo/UBERON_0002228 http://purl.obolibrary.org/obo/PATO_0002154 http://purl.obolibrary.org/obo/UPHENO_0031331 +http://purl.obolibrary.org/obo/UBERON_0001424 http://purl.obolibrary.org/obo/PATO_0001592 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a/src/curation/upheno-fillers/hp/malformedAnatomicalEntityByType.tsv b/src/curation/upheno-fillers/hp/malformedAnatomicalEntityByType.tsv new file mode 100644 index 00000000..cf7b23b0 --- /dev/null +++ b/src/curation/upheno-fillers/hp/malformedAnatomicalEntityByType.tsv @@ -0,0 +1 @@ +anatomical_entity malformed defined_class diff --git a/src/curation/upheno-fillers/hp/mislocalisedAnatomicalEntity.tsv b/src/curation/upheno-fillers/hp/mislocalisedAnatomicalEntity.tsv new file mode 100644 index 00000000..b20d3a60 --- /dev/null +++ b/src/curation/upheno-fillers/hp/mislocalisedAnatomicalEntity.tsv @@ -0,0 +1,15 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0053580 +http://purl.obolibrary.org/obo/UBERON_0002196 http://purl.obolibrary.org/obo/UPHENO_0053583 +http://purl.obolibrary.org/obo/UBERON_0001245 http://purl.obolibrary.org/obo/UPHENO_0053661 +http://purl.obolibrary.org/obo/UBERON_0002106 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a/src/curation/upheno-fillers/hp/mislocalisedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/hp/mislocalisedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..a987175d --- /dev/null +++ b/src/curation/upheno-fillers/hp/mislocalisedAnatomicalEntityInLocation.tsv @@ -0,0 +1,5 @@ +anatomical_entity location defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001264 http://purl.obolibrary.org/obo/UPHENO_0081752 +http://purl.obolibrary.org/obo/UBERON_0000479 http://purl.obolibrary.org/obo/UBERON_0002370 http://purl.obolibrary.org/obo/UPHENO_0081754 +http://purl.obolibrary.org/obo/UBERON_0000479 http://purl.obolibrary.org/obo/UBERON_0001264 http://purl.obolibrary.org/obo/UPHENO_0081756 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0002370 http://purl.obolibrary.org/obo/UPHENO_0081757 diff --git a/src/curation/upheno-fillers/hp/necroticAnatomicalEntity.tsv 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diff --git a/src/curation/upheno-fillers/hp/spatialDeviationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/hp/spatialDeviationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..90779b0f --- /dev/null +++ b/src/curation/upheno-fillers/hp/spatialDeviationOfAnatomicalEntity.tsv @@ -0,0 +1,14 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0003623 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0003634 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001466 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0002389 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0003624 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0003635 http://purl.obolibrary.org/obo/UPHENO_0084757 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http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0008266 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001231 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0003972 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001013 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001134 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001133 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001155 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001987 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0002415 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0005291 http://purl.obolibrary.org/obo/UPHENO_0084757 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http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/mp/non-functionalAnatomicalEntity.tsv b/src/curation/upheno-fillers/mp/non-functionalAnatomicalEntity.tsv new file mode 100644 index 00000000..2050afa0 --- /dev/null +++ b/src/curation/upheno-fillers/mp/non-functionalAnatomicalEntity.tsv @@ -0,0 +1,6 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001711 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0002107 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001004 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0002113 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/mp/obstructedAnatomicalEntity.tsv b/src/curation/upheno-fillers/mp/obstructedAnatomicalEntity.tsv new file mode 100644 index 00000000..a71e2a15 --- /dev/null +++ b/src/curation/upheno-fillers/mp/obstructedAnatomicalEntity.tsv @@ -0,0 +1,16 @@ +anatomical_space defined_class +http://purl.obolibrary.org/obo/UBERON_0001638 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001707 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0003959 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001508 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001637 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0000160 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0002392 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001620 http://purl.obolibrary.org/obo/UPHENO_0084757 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mode 100644 index 00000000..30858c71 --- /dev/null +++ b/src/curation/upheno-fillers/mp/prematureClosureOfAnatomicalEntity.tsv @@ -0,0 +1,15 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084631 +http://purl.obolibrary.org/obo/UBERON_0002492 http://purl.obolibrary.org/obo/UPHENO_0084632 +http://purl.obolibrary.org/obo/UBERON_0002491 http://purl.obolibrary.org/obo/UPHENO_0084633 +http://purl.obolibrary.org/obo/UBERON_0005440 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0002490 http://purl.obolibrary.org/obo/UPHENO_0084634 +http://purl.obolibrary.org/obo/UBERON_0002489 http://purl.obolibrary.org/obo/UPHENO_0084635 +http://purl.obolibrary.org/obo/UBERON_0009198 http://purl.obolibrary.org/obo/UPHENO_0084636 +http://purl.obolibrary.org/obo/UBERON_0003954 http://purl.obolibrary.org/obo/UPHENO_0084637 +http://purl.obolibrary.org/obo/UBERON_0009199 http://purl.obolibrary.org/obo/UPHENO_0084638 +http://purl.obolibrary.org/obo/UBERON_0005404 http://purl.obolibrary.org/obo/UPHENO_0084639 +http://purl.obolibrary.org/obo/UBERON_0003685 http://purl.obolibrary.org/obo/UPHENO_0084640 +http://purl.obolibrary.org/obo/UBERON_0002221 http://purl.obolibrary.org/obo/UPHENO_0084641 +http://purl.obolibrary.org/obo/UBERON_0011161 http://purl.obolibrary.org/obo/UPHENO_0084642 +http://purl.obolibrary.org/obo/UBERON_0001725 http://purl.obolibrary.org/obo/UPHENO_0084643 diff --git a/src/curation/upheno-fillers/mp/spatialDeviationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/mp/spatialDeviationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..6c5cbd90 --- /dev/null +++ b/src/curation/upheno-fillers/mp/spatialDeviationOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001706 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/mp/wrinkledAnatomicalEntity.tsv b/src/curation/upheno-fillers/mp/wrinkledAnatomicalEntity.tsv new file mode 100644 index 00000000..483374f1 --- /dev/null +++ b/src/curation/upheno-fillers/mp/wrinkledAnatomicalEntity.tsv @@ -0,0 +1,5 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0000966 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0000014 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0008852 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/phipo/abnormalAbsenceOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfAnatomicalEntity.tsv new file mode 100644 index 00000000..cc51e16d --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008523 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/phipo/abnormalAbsenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..f8a189cd --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfBiologicalProcess.tsv @@ -0,0 +1,11 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0085030 http://purl.obolibrary.org/obo/UPHENO_0080959 +http://purl.obolibrary.org/obo/GO_0000045 http://purl.obolibrary.org/obo/UPHENO_0080960 +http://purl.obolibrary.org/obo/GO_0044409 http://purl.obolibrary.org/obo/UPHENO_0080961 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0034024 +http://purl.obolibrary.org/obo/GO_0075053 http://purl.obolibrary.org/obo/UPHENO_0080962 +http://purl.obolibrary.org/obo/GO_0008104 http://purl.obolibrary.org/obo/UPHENO_0034055 +http://purl.obolibrary.org/obo/GO_0034504 http://purl.obolibrary.org/obo/UPHENO_0080963 +http://purl.obolibrary.org/obo/GO_0009306 http://purl.obolibrary.org/obo/UPHENO_0080964 +http://purl.obolibrary.org/obo/GO_0106259 http://purl.obolibrary.org/obo/UPHENO_0080965 +http://purl.obolibrary.org/obo/GO_0044114 http://purl.obolibrary.org/obo/UPHENO_0080966 diff --git a/src/curation/upheno-fillers/phipo/abnormalAbsenceOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..cf2eb4b4 --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfBiologicalProcessInLocation.tsv @@ -0,0 +1,7 @@ +biological_process location defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/GO_0005776 http://purl.obolibrary.org/obo/UPHENO_0083948 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/GO_0005886 http://purl.obolibrary.org/obo/UPHENO_0081904 +http://purl.obolibrary.org/obo/GO_0009085 http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0081906 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0081907 +http://purl.obolibrary.org/obo/GO_0008104 http://purl.obolibrary.org/obo/GO_0005776 http://purl.obolibrary.org/obo/UPHENO_0083949 +http://purl.obolibrary.org/obo/GO_0008104 http://purl.obolibrary.org/obo/GO_0005886 http://purl.obolibrary.org/obo/UPHENO_0081908 diff --git a/src/curation/upheno-fillers/phipo/abnormalAbsenceOfChemicalEntity.tsv b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfChemicalEntity.tsv new file mode 100644 index 00000000..17f5c817 --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfChemicalEntity.tsv @@ -0,0 +1,4 @@ +chemical_entity defined_class +http://purl.obolibrary.org/obo/CHEBI_33697 http://purl.obolibrary.org/obo/UPHENO_0081911 +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/UPHENO_0048687 +http://purl.obolibrary.org/obo/CHEBI_8653 http://purl.obolibrary.org/obo/UPHENO_0081912 diff --git a/src/curation/upheno-fillers/phipo/abnormalAbsenceOfChemicalEntityInLocation.tsv b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfChemicalEntityInLocation.tsv new file mode 100644 index 00000000..1f59b6f8 --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfChemicalEntityInLocation.tsv @@ -0,0 +1,3 @@ +chemical_entity location defined_class +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0081772 +http://purl.obolibrary.org/obo/CHEBI_5385 http://purl.obolibrary.org/obo/CL_0000000 http://purl.obolibrary.org/obo/UPHENO_0081773 diff --git a/src/curation/upheno-fillers/phipo/abnormalAbsenceOfMolecularFunction.tsv b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfMolecularFunction.tsv new file mode 100644 index 00000000..4faa5228 --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAbsenceOfMolecularFunction.tsv @@ -0,0 +1,8 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0003824 http://purl.obolibrary.org/obo/UPHENO_0081813 +http://purl.obolibrary.org/obo/GO_0030246 http://purl.obolibrary.org/obo/UPHENO_0081814 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0081815 +http://purl.obolibrary.org/obo/GO_0003723 http://purl.obolibrary.org/obo/UPHENO_0081816 +http://purl.obolibrary.org/obo/GO_0008061 http://purl.obolibrary.org/obo/UPHENO_0081817 +http://purl.obolibrary.org/obo/GO_0003677 http://purl.obolibrary.org/obo/UPHENO_0081818 +http://purl.obolibrary.org/obo/GO_0004568 http://purl.obolibrary.org/obo/UPHENO_0081819 diff --git a/src/curation/upheno-fillers/phipo/abnormalAnatomicalEntity.tsv b/src/curation/upheno-fillers/phipo/abnormalAnatomicalEntity.tsv new file mode 100644 index 00000000..3063613c --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalAnatomicalEntity.tsv @@ -0,0 +1,4 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0002536 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0032179 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/phipo/abnormalBiologicalProcess.tsv b/src/curation/upheno-fillers/phipo/abnormalBiologicalProcess.tsv new file mode 100644 index 00000000..7f87457e --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormalBiologicalProcess.tsv @@ -0,0 +1,33 @@ +biological_process defined_class 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a/src/curation/upheno-fillers/phipo/abnormallyIncreasedSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/phipo/abnormallyIncreasedSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..eb72f8ef --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormallyIncreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0001072 +http://purl.obolibrary.org/obo/GO_0005811 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/phipo/abnormallyIncreasedSizeOfCellularComponent.tsv b/src/curation/upheno-fillers/phipo/abnormallyIncreasedSizeOfCellularComponent.tsv new file mode 100644 index 00000000..1f7ea178 --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormallyIncreasedSizeOfCellularComponent.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0080309 +http://purl.obolibrary.org/obo/GO_0005811 http://purl.obolibrary.org/obo/UPHENO_0080312 diff --git a/src/curation/upheno-fillers/phipo/abnormallyPrematureBiologicalProcess.tsv b/src/curation/upheno-fillers/phipo/abnormallyPrematureBiologicalProcess.tsv new file mode 100644 index 00000000..91068811 --- /dev/null +++ b/src/curation/upheno-fillers/phipo/abnormallyPrematureBiologicalProcess.tsv @@ -0,0 +1,6 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0030436 http://purl.obolibrary.org/obo/UPHENO_0080422 +http://purl.obolibrary.org/obo/GO_0044409 http://purl.obolibrary.org/obo/UPHENO_0080423 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0049440 +http://purl.obolibrary.org/obo/GO_0034293 http://purl.obolibrary.org/obo/UPHENO_0080424 +http://purl.obolibrary.org/obo/GO_0106259 http://purl.obolibrary.org/obo/UPHENO_0080425 diff --git a/src/curation/upheno-fillers/planp/abnormalAbsenceOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalAbsenceOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8185662f --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalAbsenceOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008523 diff --git a/src/curation/upheno-fillers/planp/abnormalAbsenceOfAnatomicalEntityDueToDegeneration.tsv b/src/curation/upheno-fillers/planp/abnormalAbsenceOfAnatomicalEntityDueToDegeneration.tsv new file mode 100644 index 00000000..9b835cb6 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalAbsenceOfAnatomicalEntityDueToDegeneration.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0046054 diff --git a/src/curation/upheno-fillers/planp/abnormalAbsenceOfPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalAbsenceOfPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f9722607 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalAbsenceOfPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008222 diff --git a/src/curation/upheno-fillers/planp/abnormalAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalAnatomicalEntity.tsv new file mode 100644 index 00000000..ebe14380 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0002536 diff --git a/src/curation/upheno-fillers/planp/abnormalCellularComponent.tsv b/src/curation/upheno-fillers/planp/abnormalCellularComponent.tsv new file mode 100644 index 00000000..ef36ea60 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalCellularComponent.tsv @@ -0,0 +1,2 @@ +cellular_component defined_class +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0006889 diff --git a/src/curation/upheno-fillers/planp/abnormalDistanceBetweenAnatomicalEntities.tsv b/src/curation/upheno-fillers/planp/abnormalDistanceBetweenAnatomicalEntities.tsv new file mode 100644 index 00000000..23368408 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalDistanceBetweenAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +anatomical_entity1 anatomical_entity2 defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0012019 diff --git a/src/curation/upheno-fillers/planp/abnormalMobilityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalMobilityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c6805b06 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalMobilityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0076943 diff --git a/src/curation/upheno-fillers/planp/abnormalMorphologyOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalMorphologyOfAnatomicalEntity.tsv new file mode 100644 index 00000000..00ede9ee --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalMorphologyOfAnatomicalEntity.tsv @@ -0,0 +1,17 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 diff --git a/src/curation/upheno-fillers/planp/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv b/src/curation/upheno-fillers/planp/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/planp/abnormalNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..cd61b297 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011498 diff --git a/src/curation/upheno-fillers/planp/abnormalPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..9043ea08 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0066794 diff --git a/src/curation/upheno-fillers/planp/abnormalShapeOfAnatomicalEntityByShapeType.tsv b/src/curation/upheno-fillers/planp/abnormalShapeOfAnatomicalEntityByShapeType.tsv new file mode 100644 index 00000000..f9964f25 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalShapeOfAnatomicalEntityByShapeType.tsv @@ -0,0 +1,7 @@ +entity shape defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002239 http://purl.obolibrary.org/obo/UPHENO_0042009 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000052 http://purl.obolibrary.org/obo/UPHENO_0041226 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002063 http://purl.obolibrary.org/obo/UPHENO_0041789 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002164 http://purl.obolibrary.org/obo/UPHENO_0042473 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001799 http://purl.obolibrary.org/obo/UPHENO_0041174 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002258 http://purl.obolibrary.org/obo/UPHENO_0041793 diff --git a/src/curation/upheno-fillers/planp/abnormalShapeOfPhysicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalShapeOfPhysicalEntity.tsv new file mode 100644 index 00000000..32373cd2 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalShapeOfPhysicalEntity.tsv @@ -0,0 +1,2 @@ +entity defined_class +http://purl.obolibrary.org/obo/BFO_0000002 http://purl.obolibrary.org/obo/UPHENO_0080300 diff --git a/src/curation/upheno-fillers/planp/abnormalSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormalSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c4170116 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormalSizeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0075195 diff --git a/src/curation/upheno-fillers/planp/abnormallyCurvedAnatomicalEntityByOrientation.tsv b/src/curation/upheno-fillers/planp/abnormallyCurvedAnatomicalEntityByOrientation.tsv new file mode 100644 index 00000000..7b097589 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyCurvedAnatomicalEntityByOrientation.tsv @@ -0,0 +1,3 @@ +anatomical_entity orientation defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000406 http://purl.obolibrary.org/obo/UPHENO_0031193 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002164 http://purl.obolibrary.org/obo/UPHENO_0031740 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedDistanceBetweenAnatomicalEntities.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedDistanceBetweenAnatomicalEntities.tsv new file mode 100644 index 00000000..e35085c1 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedDistanceBetweenAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +anatomical_entity1 anatomical_entity2 defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0010600 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c661e30a --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedLengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0046505 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedMobilityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedMobilityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..ca81007f --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedMobilityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0076671 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c057f89c --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063722 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..546f08b6 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0018526 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedSpeedOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedSpeedOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b22947ce --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedSpeedOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081910 diff --git a/src/curation/upheno-fillers/planp/abnormallyDecreasedWidthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyDecreasedWidthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f99bd232 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyDecreasedWidthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054567 diff --git a/src/curation/upheno-fillers/planp/abnormallyImmobileAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyImmobileAnatomicalEntity.tsv new file mode 100644 index 00000000..b7e27978 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyImmobileAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081417 diff --git a/src/curation/upheno-fillers/planp/abnormallyIncreasedDistanceBetweenAnatomicalEntities.tsv b/src/curation/upheno-fillers/planp/abnormallyIncreasedDistanceBetweenAnatomicalEntities.tsv new file mode 100644 index 00000000..c3bfcd11 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyIncreasedDistanceBetweenAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +entity1 entity2 defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054477 diff --git a/src/curation/upheno-fillers/planp/abnormallyIncreasedLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyIncreasedLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b9cad5a7 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyIncreasedLengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0072195 diff --git a/src/curation/upheno-fillers/planp/abnormallyIncreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyIncreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c6cfd6eb --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyIncreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0014240 diff --git a/src/curation/upheno-fillers/planp/abnormallyIncreasedPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyIncreasedPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..3715f319 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyIncreasedPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0010666 diff --git a/src/curation/upheno-fillers/planp/abnormallyIncreasedSpeedOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyIncreasedSpeedOfAnatomicalEntity.tsv new file mode 100644 index 00000000..91920129 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyIncreasedSpeedOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080426 diff --git a/src/curation/upheno-fillers/planp/abnormallyIncreasedWidthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/abnormallyIncreasedWidthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..a0f1a8f6 --- /dev/null +++ b/src/curation/upheno-fillers/planp/abnormallyIncreasedWidthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0006161 diff --git a/src/curation/upheno-fillers/planp/edematousAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/edematousAnatomicalEntity.tsv new file mode 100644 index 00000000..b9751032 --- /dev/null +++ b/src/curation/upheno-fillers/planp/edematousAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082498 diff --git a/src/curation/upheno-fillers/planp/hypoplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/planp/hypoplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..e31fa94a --- /dev/null +++ b/src/curation/upheno-fillers/planp/hypoplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class 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http://purl.obolibrary.org/obo/UPHENO_0059928 +http://purl.obolibrary.org/obo/GO_0008152 http://purl.obolibrary.org/obo/GO_0043226 http://purl.obolibrary.org/obo/UPHENO_0059931 +http://purl.obolibrary.org/obo/GO_0008152 http://purl.obolibrary.org/obo/GO_0005783 http://purl.obolibrary.org/obo/UPHENO_0059908 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalCellProliferationInAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalCellProliferationInAnatomicalEntity.tsv new file mode 100644 index 00000000..53687e69 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalCellProliferationInAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054392 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalCellularComponent.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalCellularComponent.tsv new file mode 100644 index 00000000..f52474d5 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalCellularComponent.tsv @@ -0,0 +1,4 @@ +cellular_component defined_class +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0006889 +http://purl.obolibrary.org/obo/GO_0005643 http://purl.obolibrary.org/obo/UPHENO_0082545 +http://purl.obolibrary.org/obo/GO_0005912 http://purl.obolibrary.org/obo/UPHENO_0082546 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalCoilingOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalCoilingOfAnatomicalEntity.tsv new file mode 100644 index 00000000..d7fc165c --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalCoilingOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0078441 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalDegenerationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalDegenerationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..45d81bb0 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalDegenerationOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0073937 +http://purl.obolibrary.org/obo/GO_0030424 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalDegenerationOfCellularComponent.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalDegenerationOfCellularComponent.tsv new file mode 100644 index 00000000..9025391d --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalDegenerationOfCellularComponent.tsv @@ -0,0 +1,3 @@ +cellular_component defined_class +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0079505 +http://purl.obolibrary.org/obo/GO_0030424 http://purl.obolibrary.org/obo/UPHENO_0079524 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalDevelopmentOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalDevelopmentOfAnatomicalEntity.tsv new file mode 100644 index 00000000..6c308ac7 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalDevelopmentOfAnatomicalEntity.tsv @@ -0,0 +1,6 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081436 +http://purl.obolibrary.org/obo/UBERON_0002606 http://purl.obolibrary.org/obo/UPHENO_0081437 +http://purl.obolibrary.org/obo/GO_0036194 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0031012 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0044840 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalLevelOfChemicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalLevelOfChemicalEntity.tsv new file mode 100644 index 00000000..0fd37d77 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalLevelOfChemicalEntity.tsv @@ -0,0 +1,9 @@ +chemical_entity defined_class +http://purl.obolibrary.org/obo/CHEBI_30413 http://purl.obolibrary.org/obo/UPHENO_0077201 +http://purl.obolibrary.org/obo/CHEBI_15422 http://purl.obolibrary.org/obo/UPHENO_0077202 +http://purl.obolibrary.org/obo/CHEBI_16865 http://purl.obolibrary.org/obo/UPHENO_0046335 +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/UPHENO_0046284 +http://purl.obolibrary.org/obo/CHEBI_16856 http://purl.obolibrary.org/obo/UPHENO_0046353 +http://purl.obolibrary.org/obo/CHEBI_28087 http://purl.obolibrary.org/obo/UPHENO_0046300 +http://purl.obolibrary.org/obo/CHEBI_18059 http://purl.obolibrary.org/obo/UPHENO_0046281 +http://purl.obolibrary.org/obo/CHEBI_15355 http://purl.obolibrary.org/obo/UPHENO_0046376 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalMolecularFunction.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalMolecularFunction.tsv new file mode 100644 index 00000000..d1a641e6 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalMolecularFunction.tsv @@ -0,0 +1,4 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0003824 http://purl.obolibrary.org/obo/UPHENO_0031742 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0031743 +http://purl.obolibrary.org/obo/GO_0016757 http://purl.obolibrary.org/obo/UPHENO_0031744 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8d7a247d --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfAnatomicalEntity.tsv @@ -0,0 +1,45 @@ +anatomical_entity defined_class 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a/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfCellularComponent.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfCellularComponent.tsv new file mode 100644 index 00000000..4dd99cb1 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfCellularComponent.tsv @@ -0,0 +1,35 @@ +cellular_component defined_class +http://purl.obolibrary.org/obo/GO_0005794 http://purl.obolibrary.org/obo/UPHENO_0067642 +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0067691 +http://purl.obolibrary.org/obo/GO_0005770 http://purl.obolibrary.org/obo/UPHENO_0067736 +http://purl.obolibrary.org/obo/GO_0005694 http://purl.obolibrary.org/obo/UPHENO_0067694 +http://purl.obolibrary.org/obo/GO_0044840 http://purl.obolibrary.org/obo/UPHENO_0067737 +http://purl.obolibrary.org/obo/GO_0005930 http://purl.obolibrary.org/obo/UPHENO_0067738 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0067645 +http://purl.obolibrary.org/obo/GO_0031965 http://purl.obolibrary.org/obo/UPHENO_0067739 +http://purl.obolibrary.org/obo/GO_0005777 http://purl.obolibrary.org/obo/UPHENO_0067699 +http://purl.obolibrary.org/obo/GO_0005730 http://purl.obolibrary.org/obo/UPHENO_0067701 +http://purl.obolibrary.org/obo/GO_0000781 http://purl.obolibrary.org/obo/UPHENO_0067651 +http://purl.obolibrary.org/obo/GO_0005911 http://purl.obolibrary.org/obo/UPHENO_0067740 +http://purl.obolibrary.org/obo/GO_0030054 http://purl.obolibrary.org/obo/UPHENO_0067741 +http://purl.obolibrary.org/obo/GO_0005739 http://purl.obolibrary.org/obo/UPHENO_0067707 +http://purl.obolibrary.org/obo/GO_0031982 http://purl.obolibrary.org/obo/UPHENO_0067742 +http://purl.obolibrary.org/obo/GO_0055037 http://purl.obolibrary.org/obo/UPHENO_0067743 +http://purl.obolibrary.org/obo/GO_0043186 http://purl.obolibrary.org/obo/UPHENO_0067744 +http://purl.obolibrary.org/obo/GO_0005783 http://purl.obolibrary.org/obo/UPHENO_0067712 +http://purl.obolibrary.org/obo/GO_0043005 http://purl.obolibrary.org/obo/UPHENO_0067664 +http://purl.obolibrary.org/obo/GO_0045202 http://purl.obolibrary.org/obo/UPHENO_0067713 +http://purl.obolibrary.org/obo/GO_0030424 http://purl.obolibrary.org/obo/UPHENO_0067666 +http://purl.obolibrary.org/obo/GO_0005886 http://purl.obolibrary.org/obo/UPHENO_0067668 +http://purl.obolibrary.org/obo/GO_0030425 http://purl.obolibrary.org/obo/UPHENO_0067669 +http://purl.obolibrary.org/obo/GO_0070160 http://purl.obolibrary.org/obo/UPHENO_0067745 +http://purl.obolibrary.org/obo/GO_0005884 http://purl.obolibrary.org/obo/UPHENO_0067746 +http://purl.obolibrary.org/obo/GO_0005764 http://purl.obolibrary.org/obo/UPHENO_0067671 +http://purl.obolibrary.org/obo/GO_0005604 http://purl.obolibrary.org/obo/UPHENO_0067672 +http://purl.obolibrary.org/obo/GO_0005769 http://purl.obolibrary.org/obo/UPHENO_0067747 +http://purl.obolibrary.org/obo/GO_0005768 http://purl.obolibrary.org/obo/UPHENO_0067748 +http://purl.obolibrary.org/obo/GO_0000932 http://purl.obolibrary.org/obo/UPHENO_0067749 +http://purl.obolibrary.org/obo/GO_0060109 http://purl.obolibrary.org/obo/UPHENO_0067750 +http://purl.obolibrary.org/obo/GO_0005929 http://purl.obolibrary.org/obo/UPHENO_0067683 +http://purl.obolibrary.org/obo/GO_0031012 http://purl.obolibrary.org/obo/UPHENO_0067718 +http://purl.obolibrary.org/obo/GO_0060107 http://purl.obolibrary.org/obo/UPHENO_0067751 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv new file mode 100644 index 00000000..6c847ca9 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv @@ -0,0 +1,35 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/GO_0031982 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0055037 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0030054 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005739 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0000781 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005911 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005930 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0031965 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005777 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005730 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005794 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005770 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005694 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0044840 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0060107 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0060109 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005929 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0031012 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0000932 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005604 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005769 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005768 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0030424 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005886 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0030425 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0070160 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005884 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005764 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0005783 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0043005 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0045202 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0043186 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfPartOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfPartOfAnatomicalEntity.tsv new file mode 100644 index 00000000..ca3ba71f --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalMorphologyOfPartOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0076692 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..095ed03d --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalNumberOfAnatomicalEntity.tsv @@ -0,0 +1,4 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011498 +http://purl.obolibrary.org/obo/GO_0031982 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0008021 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalNumberOfCellularComponent.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalNumberOfCellularComponent.tsv new file mode 100644 index 00000000..229515af --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalNumberOfCellularComponent.tsv @@ -0,0 +1,4 @@ +cellular_component defined_class +http://purl.obolibrary.org/obo/GO_0008021 http://purl.obolibrary.org/obo/UPHENO_0077337 +http://purl.obolibrary.org/obo/GO_0031982 http://purl.obolibrary.org/obo/UPHENO_0077417 +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0046183 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..9043ea08 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0066794 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalPositionOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalPositionOfAnatomicalEntity.tsv new file mode 100644 index 00000000..482af129 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalPositionOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/GO_0005739 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0018390 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalPositionOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalPositionOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalPositionOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalRateOfBiologicalProcess.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalRateOfBiologicalProcess.tsv new file mode 100644 index 00000000..18c99e1c --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalRateOfBiologicalProcess.tsv @@ -0,0 +1,4 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0032502 http://purl.obolibrary.org/obo/UPHENO_0080382 +http://purl.obolibrary.org/obo/GO_0043050 http://purl.obolibrary.org/obo/UPHENO_0080383 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0080377 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalShapeOfAnatomicalEntityByShapeType.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalShapeOfAnatomicalEntityByShapeType.tsv new file mode 100644 index 00000000..f194832f --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalShapeOfAnatomicalEntityByShapeType.tsv @@ -0,0 +1,5 @@ +entity shape defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000411 http://purl.obolibrary.org/obo/UPHENO_0041181 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000052 http://purl.obolibrary.org/obo/UPHENO_0041226 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000617 http://purl.obolibrary.org/obo/UPHENO_0041234 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000404 http://purl.obolibrary.org/obo/UPHENO_0041206 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormalSpatialPatternOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormalSpatialPatternOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f7eca072 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormalSpatialPatternOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080369 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyArrestedBiologicalProcess.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyArrestedBiologicalProcess.tsv new file mode 100644 index 00000000..f793331a --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyArrestedBiologicalProcess.tsv @@ -0,0 +1,6 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0040025 http://purl.obolibrary.org/obo/UPHENO_0018649 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0018635 +http://purl.obolibrary.org/obo/GO_0006915 http://purl.obolibrary.org/obo/UPHENO_0018650 +http://purl.obolibrary.org/obo/GO_0009790 http://purl.obolibrary.org/obo/UPHENO_0018644 +http://purl.obolibrary.org/obo/GO_0007049 http://purl.obolibrary.org/obo/UPHENO_0018645 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyBentAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyBentAnatomicalEntity.tsv new file mode 100644 index 00000000..39b4985e --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyBentAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0074399 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedFunctionalityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedFunctionalityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..cdfac1d0 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedFunctionalityOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0066927 +http://purl.obolibrary.org/obo/GO_0072687 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..052a780a --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLengthOfAnatomicalEntity.tsv @@ -0,0 +1,5 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0046505 +http://purl.obolibrary.org/obo/GO_0030424 http://purl.obolibrary.org/obo/UPHENO_0079241 +http://purl.obolibrary.org/obo/GO_0005930 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0030425 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLevelOfChemicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLevelOfChemicalEntity.tsv new file mode 100644 index 00000000..500bf84c --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLevelOfChemicalEntity.tsv @@ -0,0 +1,11 @@ +chemical_entity defined_class +http://purl.obolibrary.org/obo/CHEBI_30413 http://purl.obolibrary.org/obo/UPHENO_0080018 +http://purl.obolibrary.org/obo/CHEBI_33699 http://purl.obolibrary.org/obo/UPHENO_0066791 +http://purl.obolibrary.org/obo/CHEBI_26523 http://purl.obolibrary.org/obo/UPHENO_0080019 +http://purl.obolibrary.org/obo/CHEBI_15422 http://purl.obolibrary.org/obo/UPHENO_0066792 +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/UPHENO_0066739 +http://purl.obolibrary.org/obo/CHEBI_27363 http://purl.obolibrary.org/obo/UPHENO_0080020 +http://purl.obolibrary.org/obo/CHEBI_16240 http://purl.obolibrary.org/obo/UPHENO_0080021 +http://purl.obolibrary.org/obo/CHEBI_18059 http://purl.obolibrary.org/obo/UPHENO_0066793 +http://purl.obolibrary.org/obo/CHEBI_18248 http://purl.obolibrary.org/obo/UPHENO_0081723 +http://purl.obolibrary.org/obo/CHEBI_26034 http://purl.obolibrary.org/obo/UPHENO_0080022 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLevelOfChemicalEntityInLocation.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLevelOfChemicalEntityInLocation.tsv new file mode 100644 index 00000000..b25d5c27 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedLevelOfChemicalEntityInLocation.tsv @@ -0,0 +1,3 @@ +chemical_entity location defined_class +http://purl.obolibrary.org/obo/CHEBI_24431 http://purl.obolibrary.org/obo/GO_0005829 http://purl.obolibrary.org/obo/UPHENO_0083912 +http://purl.obolibrary.org/obo/CHEBI_29108 http://purl.obolibrary.org/obo/GO_0005829 http://purl.obolibrary.org/obo/UPHENO_0083913 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c057f89c --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063722 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..719ad281 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,6 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0000423 http://purl.obolibrary.org/obo/UPHENO_0077427 +http://purl.obolibrary.org/obo/GO_0008219 http://purl.obolibrary.org/obo/UPHENO_0082838 +http://purl.obolibrary.org/obo/GO_0008283 http://purl.obolibrary.org/obo/UPHENO_0077428 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0077429 +http://purl.obolibrary.org/obo/GO_0006915 http://purl.obolibrary.org/obo/UPHENO_0077430 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyDecreasedRateOfBiologicalProcess.tsv 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http://purl.obolibrary.org/obo/UPHENO_0083219 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c6cfd6eb --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0014240 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..392eb5eb --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,8 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008219 http://purl.obolibrary.org/obo/UPHENO_0079408 +http://purl.obolibrary.org/obo/GO_0051964 http://purl.obolibrary.org/obo/UPHENO_0081684 +http://purl.obolibrary.org/obo/GO_0008283 http://purl.obolibrary.org/obo/UPHENO_0079263 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0079251 +http://purl.obolibrary.org/obo/GO_0006915 http://purl.obolibrary.org/obo/UPHENO_0079471 +http://purl.obolibrary.org/obo/GO_0008610 http://purl.obolibrary.org/obo/UPHENO_0079292 +http://purl.obolibrary.org/obo/GO_0035825 http://purl.obolibrary.org/obo/UPHENO_0081685 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedRateOfBiologicalProcess.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedRateOfBiologicalProcess.tsv new file mode 100644 index 00000000..01abde75 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedRateOfBiologicalProcess.tsv @@ -0,0 +1,8 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0060756 http://purl.obolibrary.org/obo/UPHENO_0055149 +http://purl.obolibrary.org/obo/GO_0043050 http://purl.obolibrary.org/obo/UPHENO_0055146 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0054970 +http://purl.obolibrary.org/obo/GO_0042073 http://purl.obolibrary.org/obo/UPHENO_0055103 +http://purl.obolibrary.org/obo/GO_0018991 http://purl.obolibrary.org/obo/UPHENO_0055108 +http://purl.obolibrary.org/obo/GO_0040011 http://purl.obolibrary.org/obo/UPHENO_0054937 +http://purl.obolibrary.org/obo/GO_0030421 http://purl.obolibrary.org/obo/UPHENO_0055037 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedRateOfMolecularFunction.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedRateOfMolecularFunction.tsv new file mode 100644 index 00000000..2447d020 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedRateOfMolecularFunction.tsv @@ -0,0 +1,3 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0003824 http://purl.obolibrary.org/obo/UPHENO_0048683 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0048661 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedResistanceOfWholeOrganismToChemicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedResistanceOfWholeOrganismToChemicalEntity.tsv new file mode 100644 index 00000000..29dd0228 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedResistanceOfWholeOrganismToChemicalEntity.tsv @@ -0,0 +1,39 @@ +chemical_entity defined_class +http://purl.obolibrary.org/obo/CHEBI_472805 http://purl.obolibrary.org/obo/UPHENO_0076971 +http://purl.obolibrary.org/obo/CHEBI_27732 http://purl.obolibrary.org/obo/UPHENO_0076972 +http://purl.obolibrary.org/obo/CHEBI_23359 http://purl.obolibrary.org/obo/UPHENO_0076973 +http://purl.obolibrary.org/obo/CHEBI_8081 http://purl.obolibrary.org/obo/UPHENO_0076974 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+http://purl.obolibrary.org/obo/CHEBI_7035 http://purl.obolibrary.org/obo/UPHENO_0077008 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedResistanceOfWholeOrganismToEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedResistanceOfWholeOrganismToEntity.tsv new file mode 100644 index 00000000..659b74e5 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedResistanceOfWholeOrganismToEntity.tsv @@ -0,0 +1,48 @@ +entity defined_class +http://purl.obolibrary.org/obo/CHEBI_4046 http://purl.obolibrary.org/obo/UPHENO_0078744 +http://purl.obolibrary.org/obo/CHEBI_18243 http://purl.obolibrary.org/obo/UPHENO_0078745 +http://purl.obolibrary.org/obo/CHEBI_22977 http://purl.obolibrary.org/obo/UPHENO_0078746 +http://purl.obolibrary.org/obo/CHEBI_7035 http://purl.obolibrary.org/obo/UPHENO_0078747 +http://purl.obolibrary.org/obo/BFO_0000001 http://purl.obolibrary.org/obo/UPHENO_0082030 +http://purl.obolibrary.org/obo/CHEBI_18723 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--- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0001072 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0076935 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedSizeOfCellularComponent.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedSizeOfCellularComponent.tsv new file mode 100644 index 00000000..f679bd8f --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyIncreasedSizeOfCellularComponent.tsv @@ -0,0 +1,3 @@ +entity defined_class +http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/UPHENO_0080309 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0080311 diff --git a/src/curation/upheno-fillers/wbphenotype/abnormallyRotatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/abnormallyRotatedAnatomicalEntity.tsv new file mode 100644 index 00000000..c6c3940c --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/abnormallyRotatedAnatomicalEntity.tsv @@ -0,0 +1,3 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082022 +http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/UPHENO_0082029 diff --git a/src/curation/upheno-fillers/wbphenotype/atreticAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/atreticAnatomicalEntity.tsv new file mode 100644 index 00000000..61fa7b4a --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/atreticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063565 diff --git a/src/curation/upheno-fillers/wbphenotype/blisteredAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/blisteredAnatomicalEntity.tsv new file mode 100644 index 00000000..7e346631 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/blisteredAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011967 diff --git a/src/curation/upheno-fillers/wbphenotype/mislocalisedAnatomicalEntity.tsv b/src/curation/upheno-fillers/wbphenotype/mislocalisedAnatomicalEntity.tsv new file mode 100644 index 00000000..3cd97ed3 --- /dev/null +++ b/src/curation/upheno-fillers/wbphenotype/mislocalisedAnatomicalEntity.tsv @@ -0,0 +1,5 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0053580 +http://purl.obolibrary.org/obo/GO_0030424 http://purl.obolibrary.org/obo/UPHENO_0077192 +http://purl.obolibrary.org/obo/GO_0043005 http://purl.obolibrary.org/obo/UPHENO_0077193 +http://purl.obolibrary.org/obo/GO_0032154 http://purl.obolibrary.org/obo/UPHENO_0077194 diff --git a/src/curation/upheno-fillers/xpo/abnormalAbsenceOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8185662f --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008523 diff --git a/src/curation/upheno-fillers/xpo/abnormalAbsenceOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormalAbsenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..06c91cf1 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfBiologicalProcess.tsv @@ -0,0 +1,18 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0007634 http://purl.obolibrary.org/obo/UPHENO_0078490 +http://purl.obolibrary.org/obo/GO_0007617 http://purl.obolibrary.org/obo/UPHENO_0078491 +http://purl.obolibrary.org/obo/GO_0048266 http://purl.obolibrary.org/obo/UPHENO_0078492 +http://purl.obolibrary.org/obo/GO_0007626 http://purl.obolibrary.org/obo/UPHENO_0078493 +http://purl.obolibrary.org/obo/GO_0007638 http://purl.obolibrary.org/obo/UPHENO_0078494 +http://purl.obolibrary.org/obo/GO_0008286 http://purl.obolibrary.org/obo/UPHENO_0078495 +http://purl.obolibrary.org/obo/GO_0007631 http://purl.obolibrary.org/obo/UPHENO_0034090 +http://purl.obolibrary.org/obo/GO_0007610 http://purl.obolibrary.org/obo/UPHENO_0034056 +http://purl.obolibrary.org/obo/GO_0007632 http://purl.obolibrary.org/obo/UPHENO_0078496 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0080958 +http://purl.obolibrary.org/obo/GO_0042048 http://purl.obolibrary.org/obo/UPHENO_0078497 +http://purl.obolibrary.org/obo/GO_0071625 http://purl.obolibrary.org/obo/UPHENO_0078498 +http://purl.obolibrary.org/obo/GO_0036269 http://purl.obolibrary.org/obo/UPHENO_0078499 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0034024 +http://purl.obolibrary.org/obo/GO_0007619 http://purl.obolibrary.org/obo/UPHENO_0078500 +http://purl.obolibrary.org/obo/GO_0035187 http://purl.obolibrary.org/obo/UPHENO_0078501 +http://purl.obolibrary.org/obo/GO_0035176 http://purl.obolibrary.org/obo/UPHENO_0078502 diff --git a/src/curation/upheno-fillers/xpo/abnormalAbsenceOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalAbsenceOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormalAgenesisOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalAgenesisOfAnatomicalEntity.tsv new file mode 100644 index 00000000..86daa471 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalAgenesisOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080325 diff --git a/src/curation/upheno-fillers/xpo/abnormalAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalAnatomicalEntity.tsv new file mode 100644 index 00000000..ebe14380 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0002536 diff --git a/src/curation/upheno-fillers/xpo/abnormalBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormalBiologicalProcess.tsv new file mode 100644 index 00000000..f541c10d --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalBiologicalProcess.tsv @@ -0,0 +1,213 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0006536 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0046110 http://purl.obolibrary.org/obo/UPHENO_0078582 +http://purl.obolibrary.org/obo/GO_0007626 http://purl.obolibrary.org/obo/UPHENO_0050571 +http://purl.obolibrary.org/obo/GO_0030509 http://purl.obolibrary.org/obo/UPHENO_0050213 +http://purl.obolibrary.org/obo/GO_0003383 http://purl.obolibrary.org/obo/UPHENO_0078656 +http://purl.obolibrary.org/obo/GO_0003384 http://purl.obolibrary.org/obo/UPHENO_0078657 +http://purl.obolibrary.org/obo/GO_0019725 http://purl.obolibrary.org/obo/UPHENO_0049601 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+http://purl.obolibrary.org/obo/GO_0060026 http://purl.obolibrary.org/obo/UPHENO_0051336 +http://purl.obolibrary.org/obo/GO_0070986 http://purl.obolibrary.org/obo/UPHENO_0050189 +http://purl.obolibrary.org/obo/GO_0046083 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0006468 http://purl.obolibrary.org/obo/UPHENO_0050125 +http://purl.obolibrary.org/obo/GO_0006105 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0048266 http://purl.obolibrary.org/obo/UPHENO_0078674 +http://purl.obolibrary.org/obo/GO_0043490 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0043491 http://purl.obolibrary.org/obo/UPHENO_0050554 +http://purl.obolibrary.org/obo/GO_0009058 http://purl.obolibrary.org/obo/UPHENO_0049835 +http://purl.obolibrary.org/obo/GO_0033609 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0009056 http://purl.obolibrary.org/obo/UPHENO_0049836 +http://purl.obolibrary.org/obo/GO_0006580 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0061484 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0060271 http://purl.obolibrary.org/obo/UPHENO_0050690 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0080606 +http://purl.obolibrary.org/obo/GO_0042048 http://purl.obolibrary.org/obo/UPHENO_0050130 +http://purl.obolibrary.org/obo/GO_0006590 http://purl.obolibrary.org/obo/UPHENO_0078677 +http://purl.obolibrary.org/obo/GO_0019530 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/abnormalBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormalBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormalCoilingOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalCoilingOfAnatomicalEntity.tsv new file mode 100644 index 00000000..d7fc165c --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalCoilingOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0078441 diff --git a/src/curation/upheno-fillers/xpo/abnormalDevelopmentOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalDevelopmentOfAnatomicalEntity.tsv new file mode 100644 index 00000000..def60a39 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalDevelopmentOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081436 diff --git a/src/curation/upheno-fillers/xpo/abnormalMolecularFunction.tsv b/src/curation/upheno-fillers/xpo/abnormalMolecularFunction.tsv new file mode 100644 index 00000000..4adc72f4 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalMolecularFunction.tsv @@ -0,0 +1,19 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0016829 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0004197 http://purl.obolibrary.org/obo/UPHENO_0080025 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0031743 +http://purl.obolibrary.org/obo/GO_0001055 http://purl.obolibrary.org/obo/UPHENO_0080026 +http://purl.obolibrary.org/obo/GO_0052598 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0004711 http://purl.obolibrary.org/obo/UPHENO_0080027 +http://purl.obolibrary.org/obo/GO_0004745 http://purl.obolibrary.org/obo/UPHENO_0080028 +http://purl.obolibrary.org/obo/GO_0004707 http://purl.obolibrary.org/obo/UPHENO_0080024 +http://purl.obolibrary.org/obo/GO_0003824 http://purl.obolibrary.org/obo/UPHENO_0031742 +http://purl.obolibrary.org/obo/GO_0032451 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0035173 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016491 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016740 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0009975 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016787 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016853 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016874 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0061783 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/abnormalMorphologyOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalMorphologyOfAnatomicalEntity.tsv new file mode 100644 index 00000000..89cc10d7 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalMorphologyOfAnatomicalEntity.tsv @@ -0,0 +1,9 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 diff --git a/src/curation/upheno-fillers/xpo/abnormalMorphologyOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormalMorphologyOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalMorphologyOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv b/src/curation/upheno-fillers/xpo/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/abnormalNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..cd61b297 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011498 diff --git a/src/curation/upheno-fillers/xpo/abnormalShapeOfAnatomicalEntityByShapeType.tsv b/src/curation/upheno-fillers/xpo/abnormalShapeOfAnatomicalEntityByShapeType.tsv new file mode 100644 index 00000000..6faff14f --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalShapeOfAnatomicalEntityByShapeType.tsv @@ -0,0 +1,17 @@ +entity shape defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001796 http://purl.obolibrary.org/obo/UPHENO_0041170 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001786 http://purl.obolibrary.org/obo/UPHENO_0041122 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001784 http://purl.obolibrary.org/obo/UPHENO_0041123 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000052 http://purl.obolibrary.org/obo/UPHENO_0041226 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002285 http://purl.obolibrary.org/obo/UPHENO_0041762 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002021 http://purl.obolibrary.org/obo/UPHENO_0041201 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001879 http://purl.obolibrary.org/obo/UPHENO_0041629 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001649 http://purl.obolibrary.org/obo/UPHENO_0041214 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000617 http://purl.obolibrary.org/obo/UPHENO_0041234 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002364 http://purl.obolibrary.org/obo/UPHENO_0041702 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0002034 http://purl.obolibrary.org/obo/UPHENO_0041373 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001468 http://purl.obolibrary.org/obo/UPHENO_0041718 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001875 http://purl.obolibrary.org/obo/UPHENO_0041221 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001469 http://purl.obolibrary.org/obo/UPHENO_0041719 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000404 http://purl.obolibrary.org/obo/UPHENO_0041206 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001799 http://purl.obolibrary.org/obo/UPHENO_0041174 diff --git a/src/curation/upheno-fillers/xpo/abnormalShapeOfAnatomicalEntityByShapeTypeInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormalShapeOfAnatomicalEntityByShapeTypeInLocation.tsv new file mode 100644 index 00000000..62126e0c --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalShapeOfAnatomicalEntityByShapeTypeInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location shape defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormalWeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormalWeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..e1eff1cc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormalWeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0010763 diff --git a/src/curation/upheno-fillers/xpo/abnormallyArrestedBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyArrestedBiologicalProcess.tsv new file mode 100644 index 00000000..20c653df --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyArrestedBiologicalProcess.tsv @@ -0,0 +1,5 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0003401 http://purl.obolibrary.org/obo/UPHENO_0018651 +http://purl.obolibrary.org/obo/GO_0032502 http://purl.obolibrary.org/obo/UPHENO_0018610 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0018635 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0080552 diff --git a/src/curation/upheno-fillers/xpo/abnormallyBentAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyBentAnatomicalEntity.tsv new file mode 100644 index 00000000..39b4985e --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyBentAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0074399 diff --git a/src/curation/upheno-fillers/xpo/abnormallyClosedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyClosedAnatomicalEntity.tsv new file mode 100644 index 00000000..dec31fb3 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyClosedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0074228 diff --git a/src/curation/upheno-fillers/xpo/abnormallyCurvedAnatomicalEntityByOrientation.tsv b/src/curation/upheno-fillers/xpo/abnormallyCurvedAnatomicalEntityByOrientation.tsv new file mode 100644 index 00000000..1675636c --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyCurvedAnatomicalEntityByOrientation.tsv @@ -0,0 +1,5 @@ +anatomical_entity orientation defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001649 http://purl.obolibrary.org/obo/UPHENO_0031253 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000406 http://purl.obolibrary.org/obo/UPHENO_0031193 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001468 http://purl.obolibrary.org/obo/UPHENO_0031363 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001469 http://purl.obolibrary.org/obo/UPHENO_0031365 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedCoilingOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedCoilingOfAnatomicalEntity.tsv new file mode 100644 index 00000000..95729bd7 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedCoilingOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0079498 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedHeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedHeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..4ec56f74 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedHeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080351 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c661e30a --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedLengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0046505 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedLengthOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedLengthOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedLengthOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedMassOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedMassOfAnatomicalEntity.tsv new file mode 100644 index 00000000..a9eec4ec --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedMassOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082761 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedMobilityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedMobilityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..ca81007f --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedMobilityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0076671 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c057f89c --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063722 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedNumberOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedNumberOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedNumberOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..24f802df --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,5 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0007626 http://purl.obolibrary.org/obo/UPHENO_0077431 +http://purl.obolibrary.org/obo/GO_0036269 http://purl.obolibrary.org/obo/UPHENO_0077432 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0077429 +http://purl.obolibrary.org/obo/GO_0007631 http://purl.obolibrary.org/obo/UPHENO_0077433 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..546f08b6 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0018526 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedQualityOfBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedQualityOfBiologicalProcess.tsv new file mode 100644 index 00000000..361b8682 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedQualityOfBiologicalProcess.tsv @@ -0,0 +1,3 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0052178 +http://purl.obolibrary.org/obo/GO_0042692 http://purl.obolibrary.org/obo/UPHENO_0079485 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedQualityOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedQualityOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedQualityOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfBiologicalProcess.tsv new file mode 100644 index 00000000..14c407c8 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfBiologicalProcess.tsv @@ -0,0 +1,4 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0071929 http://purl.obolibrary.org/obo/UPHENO_0076902 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0005433 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0080288 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfMolecularFunction.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfMolecularFunction.tsv new file mode 100644 index 00000000..4f887c78 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedRateOfMolecularFunction.tsv @@ -0,0 +1,15 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0016829 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0004197 http://purl.obolibrary.org/obo/UPHENO_0077199 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0066865 +http://purl.obolibrary.org/obo/GO_0004711 http://purl.obolibrary.org/obo/UPHENO_0077200 +http://purl.obolibrary.org/obo/GO_0004707 http://purl.obolibrary.org/obo/UPHENO_0077198 +http://purl.obolibrary.org/obo/GO_0003824 http://purl.obolibrary.org/obo/UPHENO_0066897 +http://purl.obolibrary.org/obo/GO_0032451 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016491 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016740 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0009975 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016787 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016853 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016874 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0061783 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f764e9f0 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0068971 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedSizeOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedSizeOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedSizeOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedThicknessOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedThicknessOfAnatomicalEntity.tsv new file mode 100644 index 00000000..20af83a4 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedThicknessOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080790 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedVolumeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedVolumeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..5a65c101 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedVolumeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0078429 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedWeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedWeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..3234483e --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedWeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054261 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedWidthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedWidthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f99bd232 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedWidthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054567 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDecreasedWidthOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDecreasedWidthOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDecreasedWidthOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyDelayedBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyDelayedBiologicalProcess.tsv new file mode 100644 index 00000000..bf81e50e --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDelayedBiologicalProcess.tsv @@ -0,0 +1,4 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0000543 +http://purl.obolibrary.org/obo/GO_0009790 http://purl.obolibrary.org/obo/UPHENO_0000869 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0080537 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDilatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDilatedAnatomicalEntity.tsv new file mode 100644 index 00000000..6e1084c2 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDilatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084124 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDuplicatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyDuplicatedAnatomicalEntity.tsv new file mode 100644 index 00000000..ce51d6c8 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDuplicatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0075340 diff --git a/src/curation/upheno-fillers/xpo/abnormallyDuplicatedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyDuplicatedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyDuplicatedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyFusedAnatomicalEntities.tsv b/src/curation/upheno-fillers/xpo/abnormallyFusedAnatomicalEntities.tsv new file mode 100644 index 00000000..6363a024 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyFusedAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +anatomical_entity anatomical_entity_fused_with defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0078125 diff --git a/src/curation/upheno-fillers/xpo/abnormallyFusedAnatomicalEntitiesInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyFusedAnatomicalEntitiesInLocation.tsv new file mode 100644 index 00000000..e0353c20 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyFusedAnatomicalEntitiesInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity anatomical_entity_fused_with location location_fused_with defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncompleteClosureOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncompleteClosureOfAnatomicalEntity.tsv new file mode 100644 index 00000000..dc495ee7 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncompleteClosureOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0033572 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedHeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedHeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b4b43407 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedHeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063513 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b9cad5a7 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedLengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0072195 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedMobilityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedMobilityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8d6a89d0 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedMobilityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0077419 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c6cfd6eb --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0014240 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedNumberOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedNumberOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedNumberOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..e4eafade --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,5 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0007626 http://purl.obolibrary.org/obo/UPHENO_0079249 +http://purl.obolibrary.org/obo/GO_0036269 http://purl.obolibrary.org/obo/UPHENO_0079250 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0079251 +http://purl.obolibrary.org/obo/GO_0007631 http://purl.obolibrary.org/obo/UPHENO_0079252 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..3715f319 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0010666 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfBiologicalProcess.tsv new file mode 100644 index 00000000..9245d15b --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfBiologicalProcess.tsv @@ -0,0 +1,5 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008283 http://purl.obolibrary.org/obo/UPHENO_0055106 +http://purl.obolibrary.org/obo/GO_0071929 http://purl.obolibrary.org/obo/UPHENO_0076678 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0054970 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0082828 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfMolecularFunction.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfMolecularFunction.tsv new file mode 100644 index 00000000..7ede87df --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedRateOfMolecularFunction.tsv @@ -0,0 +1,15 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0016829 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0004197 http://purl.obolibrary.org/obo/UPHENO_0048685 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0048661 +http://purl.obolibrary.org/obo/GO_0004711 http://purl.obolibrary.org/obo/UPHENO_0080006 +http://purl.obolibrary.org/obo/GO_0004707 http://purl.obolibrary.org/obo/UPHENO_0080005 +http://purl.obolibrary.org/obo/GO_0003824 http://purl.obolibrary.org/obo/UPHENO_0048683 +http://purl.obolibrary.org/obo/GO_0032451 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016491 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016740 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0009975 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016787 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016853 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0016874 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0061783 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..14f0e520 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0001072 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedSizeOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedSizeOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedSizeOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedThicknessOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedThicknessOfAnatomicalEntity.tsv new file mode 100644 index 00000000..0ca1e044 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedThicknessOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0047821 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedThicknessOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedThicknessOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedThicknessOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedVolumeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedVolumeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..71147114 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedVolumeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084715 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedWeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedWeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f603c0cf --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedWeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008273 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedWidthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedWidthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..a0f1a8f6 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedWidthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0006161 diff --git a/src/curation/upheno-fillers/xpo/abnormallyIncreasedWidthOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyIncreasedWidthOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyIncreasedWidthOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyInvertedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallyInvertedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyInvertedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/abnormallyOpenAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyOpenAnatomicalEntity.tsv new file mode 100644 index 00000000..c504ed48 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyOpenAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0075655 diff --git a/src/curation/upheno-fillers/xpo/abnormallyPrematureBiologicalProcess.tsv b/src/curation/upheno-fillers/xpo/abnormallyPrematureBiologicalProcess.tsv new file mode 100644 index 00000000..84501121 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyPrematureBiologicalProcess.tsv @@ -0,0 +1,3 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0049440 +http://purl.obolibrary.org/obo/GO_0007552 http://purl.obolibrary.org/obo/UPHENO_0080421 diff --git a/src/curation/upheno-fillers/xpo/abnormallyProtrudingAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/abnormallyProtrudingAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallyProtrudingAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/abnormallySegmentedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/abnormallySegmentedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/abnormallySegmentedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/bifurcatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/bifurcatedAnatomicalEntity.tsv new file mode 100644 index 00000000..3ebc6585 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/bifurcatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0055805 diff --git a/src/curation/upheno-fillers/xpo/bifurcatedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/bifurcatedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/bifurcatedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/disorganizedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/disorganizedAnatomicalEntity.tsv new file mode 100644 index 00000000..86f147d1 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/disorganizedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084685 diff --git a/src/curation/upheno-fillers/xpo/edematousAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/edematousAnatomicalEntity.tsv new file mode 100644 index 00000000..b9751032 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/edematousAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082498 diff --git a/src/curation/upheno-fillers/xpo/malformedAnatomicalEntityByType.tsv b/src/curation/upheno-fillers/xpo/malformedAnatomicalEntityByType.tsv new file mode 100644 index 00000000..a7110691 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/malformedAnatomicalEntityByType.tsv @@ -0,0 +1,18 @@ +anatomical_entity malformed defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000646 http://purl.obolibrary.org/obo/UPHENO_0076957 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030010 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030005 http://purl.obolibrary.org/obo/UPHENO_0076958 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030004 http://purl.obolibrary.org/obo/UPHENO_0076959 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030001 http://purl.obolibrary.org/obo/UPHENO_0076960 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030012 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030000 http://purl.obolibrary.org/obo/UPHENO_0076961 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030007 http://purl.obolibrary.org/obo/UPHENO_0076962 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030006 http://purl.obolibrary.org/obo/UPHENO_0076963 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000630 http://purl.obolibrary.org/obo/UPHENO_0076964 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000620 http://purl.obolibrary.org/obo/UPHENO_0076965 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030003 http://purl.obolibrary.org/obo/UPHENO_0076966 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000636 http://purl.obolibrary.org/obo/UPHENO_0076967 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030002 http://purl.obolibrary.org/obo/UPHENO_0076968 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000615 http://purl.obolibrary.org/obo/UPHENO_0076969 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030013 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030009 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/xpo/metaplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/metaplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..c41e002a --- /dev/null +++ b/src/curation/upheno-fillers/xpo/metaplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080376 diff --git a/src/curation/upheno-fillers/xpo/mislocalisedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/mislocalisedAnatomicalEntity.tsv new file mode 100644 index 00000000..32fe049b --- /dev/null +++ b/src/curation/upheno-fillers/xpo/mislocalisedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0053580 diff --git a/src/curation/upheno-fillers/xpo/mislocalisedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/xpo/mislocalisedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/xpo/mislocalisedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/xpo/necroticAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/necroticAnatomicalEntity.tsv new file mode 100644 index 00000000..0d65a24a --- /dev/null +++ b/src/curation/upheno-fillers/xpo/necroticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081698 diff --git a/src/curation/upheno-fillers/xpo/neoplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/neoplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..6cc392b9 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/neoplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081769 diff --git a/src/curation/upheno-fillers/xpo/paralysedAnatomicalEntity.tsv b/src/curation/upheno-fillers/xpo/paralysedAnatomicalEntity.tsv new file mode 100644 index 00000000..c3012971 --- /dev/null +++ b/src/curation/upheno-fillers/xpo/paralysedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081700 diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8185662f --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008523 diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntityDueToDegeneration.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntityDueToDegeneration.tsv new file mode 100644 index 00000000..9b835cb6 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntityDueToDegeneration.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0046054 diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..7d70ba89 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfBiologicalProcess.tsv @@ -0,0 +1,24 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0007634 http://purl.obolibrary.org/obo/UPHENO_0078490 +http://purl.obolibrary.org/obo/GO_0007601 http://purl.obolibrary.org/obo/UPHENO_0078456 +http://purl.obolibrary.org/obo/GO_0046660 http://purl.obolibrary.org/obo/UPHENO_0078505 +http://purl.obolibrary.org/obo/GO_0051301 http://purl.obolibrary.org/obo/UPHENO_0034038 +http://purl.obolibrary.org/obo/GO_0030866 http://purl.obolibrary.org/obo/UPHENO_0078506 +http://purl.obolibrary.org/obo/GO_0086005 http://purl.obolibrary.org/obo/UPHENO_0078507 +http://purl.obolibrary.org/obo/GO_0007632 http://purl.obolibrary.org/obo/UPHENO_0078496 +http://purl.obolibrary.org/obo/GO_0008015 http://purl.obolibrary.org/obo/UPHENO_0078508 +http://purl.obolibrary.org/obo/GO_0050802 http://purl.obolibrary.org/obo/UPHENO_0078509 +http://purl.obolibrary.org/obo/GO_0008345 http://purl.obolibrary.org/obo/UPHENO_0078510 +http://purl.obolibrary.org/obo/GO_0060215 http://purl.obolibrary.org/obo/UPHENO_0078511 +http://purl.obolibrary.org/obo/GO_0060005 http://purl.obolibrary.org/obo/UPHENO_0078512 +http://purl.obolibrary.org/obo/GO_0061515 http://purl.obolibrary.org/obo/UPHENO_0078513 +http://purl.obolibrary.org/obo/GO_0008283 http://purl.obolibrary.org/obo/UPHENO_0078514 +http://purl.obolibrary.org/obo/GO_0042407 http://purl.obolibrary.org/obo/UPHENO_0078515 +http://purl.obolibrary.org/obo/GO_0036269 http://purl.obolibrary.org/obo/UPHENO_0078499 +http://purl.obolibrary.org/obo/GO_0009652 http://purl.obolibrary.org/obo/UPHENO_0078516 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0034024 +http://purl.obolibrary.org/obo/GO_0060047 http://purl.obolibrary.org/obo/UPHENO_0078517 +http://purl.obolibrary.org/obo/GO_0001966 http://purl.obolibrary.org/obo/UPHENO_0078518 +http://purl.obolibrary.org/obo/GO_0003319 http://purl.obolibrary.org/obo/UPHENO_0078519 +http://purl.obolibrary.org/obo/GO_0003309 http://purl.obolibrary.org/obo/UPHENO_0078520 +http://purl.obolibrary.org/obo/GO_0001947 http://purl.obolibrary.org/obo/UPHENO_0078467 diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfChemicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfChemicalEntityInLocation.tsv new file mode 100644 index 00000000..1aad9b8a --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfChemicalEntityInLocation.tsv @@ -0,0 +1 @@ +chemical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalAbsenceOfPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalAbsenceOfPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f9722607 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAbsenceOfPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008222 diff --git a/src/curation/upheno-fillers/zp/abnormalAgenesisOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalAgenesisOfAnatomicalEntity.tsv new file mode 100644 index 00000000..86daa471 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAgenesisOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080325 diff --git a/src/curation/upheno-fillers/zp/abnormalAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalAnatomicalEntity.tsv new file mode 100644 index 00000000..ebe14380 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0002536 diff --git a/src/curation/upheno-fillers/zp/abnormalBiologicalProcess.tsv b/src/curation/upheno-fillers/zp/abnormalBiologicalProcess.tsv new file mode 100644 index 00000000..250785f7 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalBiologicalProcess.tsv @@ -0,0 +1,969 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0032922 http://purl.obolibrary.org/obo/UPHENO_0050885 +http://purl.obolibrary.org/obo/GO_0050976 http://purl.obolibrary.org/obo/UPHENO_0050206 +http://purl.obolibrary.org/obo/GO_0003146 http://purl.obolibrary.org/obo/UPHENO_0050886 +http://purl.obolibrary.org/obo/GO_0006898 http://purl.obolibrary.org/obo/UPHENO_0050207 +http://purl.obolibrary.org/obo/GO_0007501 http://purl.obolibrary.org/obo/UPHENO_0050887 +http://purl.obolibrary.org/obo/GO_0003147 http://purl.obolibrary.org/obo/UPHENO_0050888 +http://purl.obolibrary.org/obo/GO_0050975 http://purl.obolibrary.org/obo/UPHENO_0050208 +http://purl.obolibrary.org/obo/GO_0050973 http://purl.obolibrary.org/obo/UPHENO_0050210 +http://purl.obolibrary.org/obo/GO_0007507 http://purl.obolibrary.org/obo/UPHENO_0050138 +http://purl.obolibrary.org/obo/GO_1990266 http://purl.obolibrary.org/obo/UPHENO_0050211 +http://purl.obolibrary.org/obo/GO_0030509 http://purl.obolibrary.org/obo/UPHENO_0050213 +http://purl.obolibrary.org/obo/GO_0003140 http://purl.obolibrary.org/obo/UPHENO_0050893 +http://purl.obolibrary.org/obo/GO_0003143 http://purl.obolibrary.org/obo/UPHENO_0050895 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00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalCellProliferationInAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalCellProliferationInAnatomicalEntity.tsv new file mode 100644 index 00000000..53687e69 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalCellProliferationInAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054392 diff --git a/src/curation/upheno-fillers/zp/abnormalCellularComponent-modified.tsv b/src/curation/upheno-fillers/zp/abnormalCellularComponent-modified.tsv new file mode 100644 index 00000000..ae66c72d --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalCellularComponent-modified.tsv @@ -0,0 +1 @@ +cellular_component defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalCoilingOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalCoilingOfAnatomicalEntity.tsv new file mode 100644 index 00000000..d7fc165c --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalCoilingOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0078441 diff --git a/src/curation/upheno-fillers/zp/abnormalColorOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalColorOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8f1ff7b5 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalColorOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080210 diff --git a/src/curation/upheno-fillers/zp/abnormalColorOfAnatomicalEntityByColor.tsv b/src/curation/upheno-fillers/zp/abnormalColorOfAnatomicalEntityByColor.tsv new file mode 100644 index 00000000..bca600b2 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalColorOfAnatomicalEntityByColor.tsv @@ -0,0 +1,16 @@ +color entity defined_class +http://purl.obolibrary.org/obo/PATO_0001284 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083467 +http://purl.obolibrary.org/obo/PATO_0001251 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083468 +http://purl.obolibrary.org/obo/PATO_0000324 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083442 +http://purl.obolibrary.org/obo/PATO_0000336 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083469 +http://purl.obolibrary.org/obo/PATO_0000952 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083470 +http://purl.obolibrary.org/obo/PATO_0001287 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083471 +http://purl.obolibrary.org/obo/PATO_0001286 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083472 +http://purl.obolibrary.org/obo/PATO_0000320 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083462 +http://purl.obolibrary.org/obo/PATO_0001266 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083473 +http://purl.obolibrary.org/obo/PATO_0001944 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083474 +http://purl.obolibrary.org/obo/PATO_0000317 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083475 +http://purl.obolibrary.org/obo/PATO_0000014 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083450 +http://purl.obolibrary.org/obo/PATO_0000322 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083451 +http://purl.obolibrary.org/obo/PATO_0000323 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083452 +http://purl.obolibrary.org/obo/PATO_0000950 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083466 diff --git a/src/curation/upheno-fillers/zp/abnormalConstrictionOfAnatomicalEntity-modified.tsv b/src/curation/upheno-fillers/zp/abnormalConstrictionOfAnatomicalEntity-modified.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalConstrictionOfAnatomicalEntity-modified.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormalConstrictionOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalConstrictionOfAnatomicalEntity.tsv new file mode 100644 index 00000000..e46ae58c --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalConstrictionOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081834 diff --git a/src/curation/upheno-fillers/zp/abnormalDegenerationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalDegenerationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..44ce495b --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalDegenerationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0073937 diff --git a/src/curation/upheno-fillers/zp/abnormalDegenerationOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalDegenerationOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalDegenerationOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalDegenerationOfCellularComponentInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalDegenerationOfCellularComponentInLocation.tsv new file mode 100644 index 00000000..4b82e9a0 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalDegenerationOfCellularComponentInLocation.tsv @@ -0,0 +1 @@ +cellular_component location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalDistanceBetweenAnatomicalEntities.tsv b/src/curation/upheno-fillers/zp/abnormalDistanceBetweenAnatomicalEntities.tsv new file mode 100644 index 00000000..23368408 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalDistanceBetweenAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +anatomical_entity1 anatomical_entity2 defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0012019 diff --git a/src/curation/upheno-fillers/zp/abnormalFunctionalityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalFunctionalityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..32925088 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalFunctionalityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0002332 diff --git a/src/curation/upheno-fillers/zp/abnormalFunctionalityOfPartOfAnatomicalEntity-modified.tsv b/src/curation/upheno-fillers/zp/abnormalFunctionalityOfPartOfAnatomicalEntity-modified.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalFunctionalityOfPartOfAnatomicalEntity-modified.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormalHasFewerPartsOfTypeAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalHasFewerPartsOfTypeAnatomicalEntity.tsv new file mode 100644 index 00000000..64b71c51 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalHasFewerPartsOfTypeAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +part_anatomical_entity whole_anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011318 diff --git a/src/curation/upheno-fillers/zp/abnormalHasFewerPartsOfTypeAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalHasFewerPartsOfTypeAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..686251ef --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalHasFewerPartsOfTypeAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +location part_anatomical_entity whole_anatomical_entity defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalHeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalHeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c4fa20e8 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalHeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081423 diff --git a/src/curation/upheno-fillers/zp/abnormalLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalLengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormalLevelOfChemicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalLevelOfChemicalEntityInLocation.tsv new file mode 100644 index 00000000..1aad9b8a --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalLevelOfChemicalEntityInLocation.tsv @@ -0,0 +1 @@ +chemical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalLevelOfChemicalEntityWithRoleInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalLevelOfChemicalEntityWithRoleInLocation.tsv new file mode 100644 index 00000000..44f878af --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalLevelOfChemicalEntityWithRoleInLocation.tsv @@ -0,0 +1 @@ +location role defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalMassDensityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalMassDensityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c7fa38e4 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalMassDensityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084653 diff --git a/src/curation/upheno-fillers/zp/abnormalMobilityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalMobilityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c6805b06 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalMobilityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0076943 diff --git a/src/curation/upheno-fillers/zp/abnormalMolecularFunction.tsv b/src/curation/upheno-fillers/zp/abnormalMolecularFunction.tsv new file mode 100644 index 00000000..50540bbf --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalMolecularFunction.tsv @@ -0,0 +1,22 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0005272 http://purl.obolibrary.org/obo/UPHENO_0031746 +http://purl.obolibrary.org/obo/GO_0008121 http://purl.obolibrary.org/obo/UPHENO_0082998 +http://purl.obolibrary.org/obo/GO_0004364 http://purl.obolibrary.org/obo/UPHENO_0082999 +http://purl.obolibrary.org/obo/GO_0004035 http://purl.obolibrary.org/obo/UPHENO_0031747 +http://purl.obolibrary.org/obo/GO_0008137 http://purl.obolibrary.org/obo/UPHENO_0083000 +http://purl.obolibrary.org/obo/GO_0009008 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0003720 http://purl.obolibrary.org/obo/UPHENO_0031748 +http://purl.obolibrary.org/obo/GO_0005249 http://purl.obolibrary.org/obo/UPHENO_0031750 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0031743 +http://purl.obolibrary.org/obo/GO_0140938 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0017095 http://purl.obolibrary.org/obo/UPHENO_0031751 +http://purl.obolibrary.org/obo/GO_0001588 http://purl.obolibrary.org/obo/UPHENO_0083001 +http://purl.obolibrary.org/obo/GO_0004129 http://purl.obolibrary.org/obo/UPHENO_0031752 +http://purl.obolibrary.org/obo/GO_0055077 http://purl.obolibrary.org/obo/UPHENO_0031753 +http://purl.obolibrary.org/obo/GO_0016772 http://purl.obolibrary.org/obo/UPHENO_0031754 +http://purl.obolibrary.org/obo/GO_0004708 http://purl.obolibrary.org/obo/UPHENO_0031755 +http://purl.obolibrary.org/obo/GO_0140674 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0019799 http://purl.obolibrary.org/obo/UPHENO_0031756 +http://purl.obolibrary.org/obo/GO_0070738 http://purl.obolibrary.org/obo/UPHENO_0031757 +http://purl.obolibrary.org/obo/GO_0009881 http://purl.obolibrary.org/obo/UPHENO_0080363 +http://purl.obolibrary.org/obo/GO_0008086 http://purl.obolibrary.org/obo/UPHENO_0031758 diff --git a/src/curation/upheno-fillers/zp/abnormalMorphologyOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalMorphologyOfAnatomicalEntity.tsv new file mode 100644 index 00000000..3e36ee19 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalMorphologyOfAnatomicalEntity.tsv @@ -0,0 +1,33 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0020584 diff --git a/src/curation/upheno-fillers/zp/abnormalMorphologyOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalMorphologyOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalMorphologyOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv b/src/curation/upheno-fillers/zp/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalMorphologyOfPartOfAnatomicalEntity-modified.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormalNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormalNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..cd61b297 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011498 diff --git a/src/curation/upheno-fillers/zp/abnormalNumberOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormalNumberOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormalNumberOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormalPigmentationOfAnatomicalEntity.tsv 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file mode 100644 index 00000000..4773013c --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDecreasedRateOfContinuousBiologicalProcess.tsv @@ -0,0 +1,5 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0060047 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0050890 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0008015 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormallyDecreasedRateOfMolecularFunction.tsv b/src/curation/upheno-fillers/zp/abnormallyDecreasedRateOfMolecularFunction.tsv new file mode 100644 index 00000000..3a9a7bef --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDecreasedRateOfMolecularFunction.tsv @@ -0,0 +1,5 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0004683 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00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDecreasedSizeOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyDecreasedSpeedOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyDecreasedSpeedOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b22947ce --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDecreasedSpeedOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081910 diff --git a/src/curation/upheno-fillers/zp/abnormallyDecreasedStrengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyDecreasedStrengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..53314f60 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDecreasedStrengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity 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b/src/curation/upheno-fillers/zp/abnormallyDelayedBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDelayedBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyDetachedAnatomicalEntities.tsv b/src/curation/upheno-fillers/zp/abnormallyDetachedAnatomicalEntities.tsv new file mode 100644 index 00000000..2868225a --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDetachedAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +anatomical_entity anatomical_entity_detached_from defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081667 diff --git a/src/curation/upheno-fillers/zp/abnormallyDilatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyDilatedAnatomicalEntity.tsv new file mode 100644 index 00000000..6e1084c2 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDilatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084124 diff --git a/src/curation/upheno-fillers/zp/abnormallyDuplicatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyDuplicatedAnatomicalEntity.tsv new file mode 100644 index 00000000..ce51d6c8 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDuplicatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0075340 diff --git a/src/curation/upheno-fillers/zp/abnormallyDuplicatedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyDuplicatedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyDuplicatedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyEvertedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyEvertedAnatomicalEntity.tsv new file mode 100644 index 00000000..29bfb9de --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyEvertedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080241 diff --git a/src/curation/upheno-fillers/zp/abnormallyFusedAnatomicalEntities.tsv b/src/curation/upheno-fillers/zp/abnormallyFusedAnatomicalEntities.tsv new file mode 100644 index 00000000..6363a024 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyFusedAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +anatomical_entity anatomical_entity_fused_with defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0078125 diff --git a/src/curation/upheno-fillers/zp/abnormallyFusedAnatomicalEntitiesInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyFusedAnatomicalEntitiesInLocation.tsv new file mode 100644 index 00000000..e0353c20 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyFusedAnatomicalEntitiesInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity anatomical_entity_fused_with location location_fused_with defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyGreasyAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyGreasyAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyGreasyAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormallyImmobileAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyImmobileAnatomicalEntity.tsv new file mode 100644 index 00000000..b7e27978 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyImmobileAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081417 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncompleteClosureOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncompleteClosureOfAnatomicalEntity.tsv new file mode 100644 index 00000000..dc495ee7 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncompleteClosureOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0033572 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedDistanceBetweenAnatomicalEntities.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedDistanceBetweenAnatomicalEntities.tsv new file mode 100644 index 00000000..c3bfcd11 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedDistanceBetweenAnatomicalEntities.tsv @@ -0,0 +1,2 @@ +entity1 entity2 defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0054477 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedFunctionalityOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedFunctionalityOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedFunctionalityOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedHeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedHeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b4b43407 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedHeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063513 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedHeightOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedHeightOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedHeightOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedLengthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedLengthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..b9cad5a7 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedLengthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0072195 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedLengthOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedLengthOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedLengthOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedLevelOfChemicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedLevelOfChemicalEntityInLocation.tsv new file mode 100644 index 00000000..1aad9b8a --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedLevelOfChemicalEntityInLocation.tsv @@ -0,0 +1 @@ +chemical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedLevelOfChemicalEntityWithRoleInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedLevelOfChemicalEntityWithRoleInLocation.tsv new file mode 100644 index 00000000..44f878af --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedLevelOfChemicalEntityWithRoleInLocation.tsv @@ -0,0 +1 @@ +location role defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedMassDensityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedMassDensityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..9b76205d --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedMassDensityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084449 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedMobilityOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedMobilityOfAnatomicalEntity.tsv new file mode 100644 index 00000000..8d6a89d0 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedMobilityOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0077419 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedNumberOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedNumberOfAnatomicalEntity.tsv new file mode 100644 index 00000000..c6cfd6eb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedNumberOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0014240 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedNumberOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedNumberOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedNumberOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv new file mode 100644 index 00000000..059c85af --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedOccurrenceOfBiologicalProcess.tsv @@ -0,0 +1,296 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0006897 http://purl.obolibrary.org/obo/UPHENO_0079254 +http://purl.obolibrary.org/obo/GO_0032007 http://purl.obolibrary.org/obo/UPHENO_0079255 +http://purl.obolibrary.org/obo/GO_0006412 http://purl.obolibrary.org/obo/UPHENO_0079256 +http://purl.obolibrary.org/obo/GO_0046351 http://purl.obolibrary.org/obo/UPHENO_0079257 +http://purl.obolibrary.org/obo/GO_1990266 http://purl.obolibrary.org/obo/UPHENO_0079258 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a/src/curation/upheno-fillers/zp/abnormallyIncreasedRateOfContinuousBiologicalProcess.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedRateOfContinuousBiologicalProcess.tsv new file mode 100644 index 00000000..d9616c72 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedRateOfContinuousBiologicalProcess.tsv @@ -0,0 +1,3 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0060047 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedRateOfMolecularFunction.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedRateOfMolecularFunction.tsv new file mode 100644 index 00000000..022a6e84 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedRateOfMolecularFunction.tsv @@ -0,0 +1,4 @@ +molecular_function defined_class +http://purl.obolibrary.org/obo/GO_0004708 http://purl.obolibrary.org/obo/UPHENO_0048684 +http://purl.obolibrary.org/obo/GO_0004197 http://purl.obolibrary.org/obo/UPHENO_0048685 +http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/UPHENO_0048661 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedSizeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedSizeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..14f0e520 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedSizeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0001072 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedSizeOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedSizeOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedSizeOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedSpeedOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedSpeedOfAnatomicalEntity.tsv new file mode 100644 index 00000000..91920129 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedSpeedOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080426 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedThicknessOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedThicknessOfAnatomicalEntity.tsv new file mode 100644 index 00000000..0ca1e044 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedThicknessOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0047821 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedThicknessOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedThicknessOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedThicknessOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedVolumeOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedVolumeOfAnatomicalEntity.tsv new file mode 100644 index 00000000..71147114 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedVolumeOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084715 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedWeightOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedWeightOfAnatomicalEntity.tsv new file mode 100644 index 00000000..f603c0cf --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedWeightOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0008273 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedWidthOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedWidthOfAnatomicalEntity.tsv new file mode 100644 index 00000000..a0f1a8f6 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedWidthOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0006161 diff --git a/src/curation/upheno-fillers/zp/abnormallyIncreasedWidthOfAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyIncreasedWidthOfAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyIncreasedWidthOfAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyInvertedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyInvertedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyInvertedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyOpaqueAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyOpaqueAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyOpaqueAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormallyOpenAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyOpenAnatomicalEntity.tsv new file mode 100644 index 00000000..c504ed48 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyOpenAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0075655 diff --git a/src/curation/upheno-fillers/zp/abnormallyPatchyPigmentationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyPatchyPigmentationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyPatchyPigmentationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormallyPrematureBiologicalProcess.tsv b/src/curation/upheno-fillers/zp/abnormallyPrematureBiologicalProcess.tsv new file mode 100644 index 00000000..f3658b20 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyPrematureBiologicalProcess.tsv @@ -0,0 +1,31 @@ +biological_process defined_class +http://purl.obolibrary.org/obo/GO_0038092 http://purl.obolibrary.org/obo/UPHENO_0049500 +http://purl.obolibrary.org/obo/GO_0006413 http://purl.obolibrary.org/obo/UPHENO_0049472 +http://purl.obolibrary.org/obo/GO_0001541 http://purl.obolibrary.org/obo/UPHENO_0049501 +http://purl.obolibrary.org/obo/GO_0003006 http://purl.obolibrary.org/obo/UPHENO_0049451 +http://purl.obolibrary.org/obo/GO_0048232 http://purl.obolibrary.org/obo/UPHENO_0049502 +http://purl.obolibrary.org/obo/GO_0001964 http://purl.obolibrary.org/obo/UPHENO_0084757 +http://purl.obolibrary.org/obo/GO_0006396 http://purl.obolibrary.org/obo/UPHENO_0049504 +http://purl.obolibrary.org/obo/GO_0008354 http://purl.obolibrary.org/obo/UPHENO_0049525 +http://purl.obolibrary.org/obo/GO_0061053 http://purl.obolibrary.org/obo/UPHENO_0049474 +http://purl.obolibrary.org/obo/GO_0009790 http://purl.obolibrary.org/obo/UPHENO_0049506 +http://purl.obolibrary.org/obo/GO_0042552 http://purl.obolibrary.org/obo/UPHENO_0049476 +http://purl.obolibrary.org/obo/GO_0050936 http://purl.obolibrary.org/obo/UPHENO_0049528 +http://purl.obolibrary.org/obo/GO_0030182 http://purl.obolibrary.org/obo/UPHENO_0049479 +http://purl.obolibrary.org/obo/GO_0035476 http://purl.obolibrary.org/obo/UPHENO_0049481 +http://purl.obolibrary.org/obo/GO_0001503 http://purl.obolibrary.org/obo/UPHENO_0049441 +http://purl.obolibrary.org/obo/GO_0003309 http://purl.obolibrary.org/obo/UPHENO_0049483 +http://purl.obolibrary.org/obo/GO_0048922 http://purl.obolibrary.org/obo/UPHENO_0049485 +http://purl.obolibrary.org/obo/GO_0003415 http://purl.obolibrary.org/obo/UPHENO_0049486 +http://purl.obolibrary.org/obo/GO_0048885 http://purl.obolibrary.org/obo/UPHENO_0049487 +http://purl.obolibrary.org/obo/GO_0030316 http://purl.obolibrary.org/obo/UPHENO_0049533 +http://purl.obolibrary.org/obo/GO_0043010 http://purl.obolibrary.org/obo/UPHENO_0049556 +http://purl.obolibrary.org/obo/GO_0002040 http://purl.obolibrary.org/obo/UPHENO_0049489 +http://purl.obolibrary.org/obo/GO_0048669 http://purl.obolibrary.org/obo/UPHENO_0049558 +http://purl.obolibrary.org/obo/GO_0002063 http://purl.obolibrary.org/obo/UPHENO_0049517 +http://purl.obolibrary.org/obo/GO_0060612 http://purl.obolibrary.org/obo/UPHENO_0049537 +http://purl.obolibrary.org/obo/GO_0035188 http://purl.obolibrary.org/obo/UPHENO_0049563 +http://purl.obolibrary.org/obo/GO_0008150 http://purl.obolibrary.org/obo/UPHENO_0049440 +http://purl.obolibrary.org/obo/GO_0055010 http://purl.obolibrary.org/obo/UPHENO_0049540 +http://purl.obolibrary.org/obo/GO_1990636 http://purl.obolibrary.org/obo/UPHENO_0083017 +http://purl.obolibrary.org/obo/GO_0001958 http://purl.obolibrary.org/obo/UPHENO_0049445 diff --git a/src/curation/upheno-fillers/zp/abnormallyPrematureBiologicalProcessInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyPrematureBiologicalProcessInLocation.tsv new file mode 100644 index 00000000..1ff90430 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyPrematureBiologicalProcessInLocation.tsv @@ -0,0 +1 @@ +biological_process location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyProminentAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyProminentAnatomicalEntity.tsv new file mode 100644 index 00000000..2a1ae2f4 --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyProminentAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082900 diff --git a/src/curation/upheno-fillers/zp/abnormallyProtrudingAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyProtrudingAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyProtrudingAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/abnormallyProtrudingAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyProtrudingAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyProtrudingAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyPunctateAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyPunctateAnatomicalEntity.tsv new file mode 100644 index 00000000..525cc3dd --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyPunctateAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084708 diff --git a/src/curation/upheno-fillers/zp/abnormallyPunctateAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallyPunctateAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyPunctateAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/abnormallyRotatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/abnormallyRotatedAnatomicalEntity.tsv new file mode 100644 index 00000000..9ecc5e2d --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallyRotatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082022 diff --git a/src/curation/upheno-fillers/zp/abnormallySegmentedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/abnormallySegmentedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/abnormallySegmentedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/aplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/aplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..03cb1b52 --- /dev/null +++ b/src/curation/upheno-fillers/zp/aplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081451 diff --git a/src/curation/upheno-fillers/zp/aplasticHypoplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/aplasticHypoplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..bbfea9cd --- /dev/null +++ b/src/curation/upheno-fillers/zp/aplasticHypoplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080079 diff --git a/src/curation/upheno-fillers/zp/atreticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/atreticAnatomicalEntity.tsv new file mode 100644 index 00000000..61fa7b4a --- /dev/null +++ b/src/curation/upheno-fillers/zp/atreticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0063565 diff --git a/src/curation/upheno-fillers/zp/atrophiedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/atrophiedAnatomicalEntity.tsv new file mode 100644 index 00000000..fc7fbf01 --- /dev/null +++ b/src/curation/upheno-fillers/zp/atrophiedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0013936 diff --git a/src/curation/upheno-fillers/zp/bifurcatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/bifurcatedAnatomicalEntity.tsv new file mode 100644 index 00000000..3ebc6585 --- /dev/null +++ b/src/curation/upheno-fillers/zp/bifurcatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0055805 diff --git a/src/curation/upheno-fillers/zp/bifurcatedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/bifurcatedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/bifurcatedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/blisteredAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/blisteredAnatomicalEntity.tsv new file mode 100644 index 00000000..7e346631 --- /dev/null +++ b/src/curation/upheno-fillers/zp/blisteredAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0011967 diff --git a/src/curation/upheno-fillers/zp/blisteredAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/blisteredAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/blisteredAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/brokenAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/brokenAnatomicalEntity.tsv new file mode 100644 index 00000000..596162c0 --- /dev/null +++ b/src/curation/upheno-fillers/zp/brokenAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081401 diff --git a/src/curation/upheno-fillers/zp/calcifiedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/calcifiedAnatomicalEntity.tsv new file mode 100644 index 00000000..09c9a97e --- /dev/null +++ b/src/curation/upheno-fillers/zp/calcifiedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0067765 diff --git a/src/curation/upheno-fillers/zp/collapsedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/collapsedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/collapsedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/cystInLocation-modified.tsv b/src/curation/upheno-fillers/zp/cystInLocation-modified.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/cystInLocation-modified.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/cystInLocation.tsv b/src/curation/upheno-fillers/zp/cystInLocation.tsv new file mode 100644 index 00000000..b38e4b3a --- /dev/null +++ b/src/curation/upheno-fillers/zp/cystInLocation.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081065 diff --git a/src/curation/upheno-fillers/zp/damagedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/damagedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/damagedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/delaminatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/delaminatedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/delaminatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/dislocatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/dislocatedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/dislocatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/disorganizedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/disorganizedAnatomicalEntity.tsv new file mode 100644 index 00000000..86f147d1 --- /dev/null +++ b/src/curation/upheno-fillers/zp/disorganizedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084685 diff --git a/src/curation/upheno-fillers/zp/dysplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/dysplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..156df18d --- /dev/null +++ b/src/curation/upheno-fillers/zp/dysplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0047299 diff --git a/src/curation/upheno-fillers/zp/edematousAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/edematousAnatomicalEntity.tsv new file mode 100644 index 00000000..b9751032 --- /dev/null +++ b/src/curation/upheno-fillers/zp/edematousAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082498 diff --git a/src/curation/upheno-fillers/zp/exsertedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/exsertedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/exsertedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/fibroticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/fibroticAnatomicalEntity.tsv new file mode 100644 index 00000000..e461b3a3 --- /dev/null +++ b/src/curation/upheno-fillers/zp/fibroticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0076294 diff --git a/src/curation/upheno-fillers/zp/foldedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/foldedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/foldedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/fracturedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/fracturedAnatomicalEntity.tsv new file mode 100644 index 00000000..910caa65 --- /dev/null +++ b/src/curation/upheno-fillers/zp/fracturedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080438 diff --git a/src/curation/upheno-fillers/zp/fracturedAnatomicalEntityByFractureType.tsv b/src/curation/upheno-fillers/zp/fracturedAnatomicalEntityByFractureType.tsv new file mode 100644 index 00000000..71597e54 --- /dev/null +++ b/src/curation/upheno-fillers/zp/fracturedAnatomicalEntityByFractureType.tsv @@ -0,0 +1,3 @@ +anatomical_entity fractured defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0040034 http://purl.obolibrary.org/obo/UPHENO_0081625 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0040040 http://purl.obolibrary.org/obo/UPHENO_0081627 diff --git a/src/curation/upheno-fillers/zp/herniatedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/herniatedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/herniatedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/hyperplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/hyperplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..0e2c837a --- /dev/null +++ b/src/curation/upheno-fillers/zp/hyperplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0083530 diff --git a/src/curation/upheno-fillers/zp/hypertrophicAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/hypertrophicAnatomicalEntity.tsv new file mode 100644 index 00000000..0f0a3168 --- /dev/null +++ b/src/curation/upheno-fillers/zp/hypertrophicAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0010000 http://purl.obolibrary.org/obo/UPHENO_0084489 diff --git a/src/curation/upheno-fillers/zp/hypoplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/hypoplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..e31fa94a --- /dev/null +++ b/src/curation/upheno-fillers/zp/hypoplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081091 diff --git a/src/curation/upheno-fillers/zp/hypoplasticAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/hypoplasticAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/hypoplasticAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/lesionedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/lesionedAnatomicalEntity.tsv new file mode 100644 index 00000000..b8d459b6 --- /dev/null +++ b/src/curation/upheno-fillers/zp/lesionedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0082742 diff --git a/src/curation/upheno-fillers/zp/lysedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/lysedAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/lysedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/malformedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/malformedAnatomicalEntity.tsv new file mode 100644 index 00000000..35753f91 --- /dev/null +++ b/src/curation/upheno-fillers/zp/malformedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0071309 diff --git a/src/curation/upheno-fillers/zp/malformedAnatomicalEntityByType.tsv b/src/curation/upheno-fillers/zp/malformedAnatomicalEntityByType.tsv new file mode 100644 index 00000000..284a2317 --- /dev/null +++ b/src/curation/upheno-fillers/zp/malformedAnatomicalEntityByType.tsv @@ -0,0 +1,10 @@ +anatomical_entity malformed defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000646 http://purl.obolibrary.org/obo/UPHENO_0076957 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030001 http://purl.obolibrary.org/obo/UPHENO_0076960 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0001465 http://purl.obolibrary.org/obo/UPHENO_0076970 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030007 http://purl.obolibrary.org/obo/UPHENO_0076962 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000630 http://purl.obolibrary.org/obo/UPHENO_0076964 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000620 http://purl.obolibrary.org/obo/UPHENO_0076965 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000636 http://purl.obolibrary.org/obo/UPHENO_0076967 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0030003 http://purl.obolibrary.org/obo/UPHENO_0076966 +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/PATO_0000615 http://purl.obolibrary.org/obo/UPHENO_0076969 diff --git a/src/curation/upheno-fillers/zp/malformedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/malformedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/malformedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/metaplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/metaplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..c41e002a --- /dev/null +++ b/src/curation/upheno-fillers/zp/metaplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0080376 diff --git a/src/curation/upheno-fillers/zp/mislocalisedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/mislocalisedAnatomicalEntity.tsv new file mode 100644 index 00000000..32fe049b --- /dev/null +++ b/src/curation/upheno-fillers/zp/mislocalisedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0053580 diff --git a/src/curation/upheno-fillers/zp/mislocalisedAnatomicalEntityInLocation.tsv b/src/curation/upheno-fillers/zp/mislocalisedAnatomicalEntityInLocation.tsv new file mode 100644 index 00000000..b7121acc --- /dev/null +++ b/src/curation/upheno-fillers/zp/mislocalisedAnatomicalEntityInLocation.tsv @@ -0,0 +1 @@ +anatomical_entity location defined_class diff --git a/src/curation/upheno-fillers/zp/necroticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/necroticAnatomicalEntity.tsv new file mode 100644 index 00000000..0d65a24a --- /dev/null +++ b/src/curation/upheno-fillers/zp/necroticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081698 diff --git a/src/curation/upheno-fillers/zp/neoplasticAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/neoplasticAnatomicalEntity.tsv new file mode 100644 index 00000000..6cc392b9 --- /dev/null +++ b/src/curation/upheno-fillers/zp/neoplasticAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081769 diff --git a/src/curation/upheno-fillers/zp/non-functionalAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/non-functionalAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/non-functionalAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/obstructedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/obstructedAnatomicalEntity.tsv new file mode 100644 index 00000000..0d844bf9 --- /dev/null +++ b/src/curation/upheno-fillers/zp/obstructedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_space defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/paralysedAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/paralysedAnatomicalEntity.tsv new file mode 100644 index 00000000..c3012971 --- /dev/null +++ b/src/curation/upheno-fillers/zp/paralysedAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0081700 diff --git a/src/curation/upheno-fillers/zp/perforateAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/perforateAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/perforateAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/spatialDeviationOfAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/spatialDeviationOfAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/spatialDeviationOfAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757 diff --git a/src/curation/upheno-fillers/zp/wrinkledAnatomicalEntity.tsv b/src/curation/upheno-fillers/zp/wrinkledAnatomicalEntity.tsv new file mode 100644 index 00000000..57c76cbb --- /dev/null +++ b/src/curation/upheno-fillers/zp/wrinkledAnatomicalEntity.tsv @@ -0,0 +1,2 @@ +anatomical_entity defined_class +http://purl.obolibrary.org/obo/UBERON_0001062 http://purl.obolibrary.org/obo/UPHENO_0084757