Update paths to use new atmos_phys 'schemes' directory.

.gitmodules

@@ -35,10 +35,10 @@
 
 [submodule "atmos_phys"]
 	path = src/atmos_phys
-	url = https://github.com/ESCOMP/atmospheric_physics
-        fxtag =  atmos_phys0_04_001
+	url = https://github.com/nusbaume/atmospheric_physics
+        fxtag = fbef341
         fxrequired = AlwaysRequired
-	fxDONOTUSEurl = https://github.com/ESCOMP/atmospheric_physics
+	fxDONOTUSEurl = https://github.com/nusbaume/atmospheric_physics
 
 [submodule "fv3"]
 	path = src/dynamics/fv3

bld/configure

@@ -2191,9 +2191,9 @@ sub write_filepath
 
     if ($simple_phys) {
       print $fh "$camsrcdir/src/physics/simple\n";
-      print $fh "$camsrcdir/src/atmos_phys/kessler\n";
-      print $fh "$camsrcdir/src/atmos_phys/held_suarez\n";
-      print $fh "$camsrcdir/src/atmos_phys/tj2016\n";
+      print $fh "$camsrcdir/src/atmos_phys/schemes/kessler\n";
+      print $fh "$camsrcdir/src/atmos_phys/schemes/held_suarez\n";
+      print $fh "$camsrcdir/src/atmos_phys/schemes/tj2016\n";
     }
 
     # Weak scaling fix. This has to come before physics/cam and before dycores
@@ -2332,8 +2332,8 @@ sub write_filepath
     print $fh "$camsrcdir/src/physics/cam\n";
 
     #Add the CCPP'ized subdirectories
-    print $fh "$camsrcdir/src/atmos_phys/zhang_mcfarlane\n";
-    print $fh "$camsrcdir/src/atmos_phys/dry_adiabatic_adjust\n";
+    print $fh "$camsrcdir/src/atmos_phys/schemes/zhang_mcfarlane\n";
+    print $fh "$camsrcdir/src/atmos_phys/schemes/dry_adiabatic_adjust\n";
 
     # Dynamics package and test utilities
     print $fh "$camsrcdir/src/dynamics/$dyn\n";
@@ -2359,7 +2359,7 @@ sub write_filepath
     print $fh "$camsrcdir/src/control\n";
     print $fh "$camsrcdir/src/utils\n";
     print $fh "$camsrcdir/src/utils/cam_ccpp\n";
-    print $fh "$camsrcdir/src/atmos_phys/utilities\n";
+    print $fh "$camsrcdir/src/atmos_phys/schemes/utilities\n";
 
 
     $fh->close;