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setup.cfg
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setup.cfg
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[metadata]
name = deeprankcore
authors = [
{ name = "Giulia Crocioni", email = "[email protected]"},
{ name = "Coos Baakman", email = "[email protected]"},
{ name = "Dani Bodor", email = "[email protected]"},
{ name = "Daniel Rademaker"},
{ name = "Gayatri Ramakrishnan"},
{ name = "Sven van der Burg"},
{ name = "Li Xue"},
{ name = "Daniil Lepikhov"},
]
classifiers =
Intended Audience :: Developers
License :: OSI Approved :: Apache Software License
Natural Language :: English
Programming Language :: Python :: 3
Programming Language :: Python :: 3.9
Programming Language :: Python :: 3.10
description = deeprankcore allows to train graph neural networks to classify protein-protein interface with a greater flexibility for the user.
keywords =
graph neural network
protein-protein interface
pytorch
long_description = file: README.md
long_description_content_type = text/markdown
project_urls =
Bug Tracker = https://github.com/DeepRank/deeprank-core/issues
url = https://github.com/DeepRank/deeprank-core
version = 1.0.0
[options]
zip_safe = False
include_package_data = True
packages = find_namespace:
python_requires = >= 3.9
install_requires =
tables >= 3.7
numpy >= 1.21.5
scipy >= 1.8.0
h5py >= 3.6.0
h5xplorer
networkx >= 2.6.3
matplotlib >= 3.5.1
pdb2sql >= 0.5.1
scikit-learn >= 1.0.2
chart-studio >= 1.1.0
biopython >= 1.79
python-louvain >= 0.16
markov-clustering >= 0.0.6.dev0
tqdm >= 4.63.0
freesasa == 2.1.0
tensorboard >= 2.9.0
protobuf <= 3.20.1
[options.extras_require]
dev =
yapf
isort
doc =
recommonmark
sphinx
sphinx_rtd_theme
test =
pylint <= 2.15.3
prospector[with_pyroma] <= 1.7.7
bump2version
coverage
pycodestyle
pytest
pytest-cov
pytest-runner
coveralls
publishing =
build
twine
wheel
[options.packages.find]
include = deeprankcore, deeprankcore.*
exclude = tests, tests.*
[coverage:run]
branch = True
source = deeprankcore