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I am working on a method to synchronize physio data from either BioPac or Labchart with BIDS-format scan data in order to convert the physio data to BIDS format (see physiopy/phys2bids#219). This requires sub-second acquisition timing information from the scan data. At the moment, I use the AcquisitionTime field heudiconv retains in the json files, but I think that the scans.tsv file would be easier to access. The only unfortunate thing is that, in the conversion, sub-second timing information is discarded. See below:
indeed, I see no immediate reason why we did not store sub-second resolution. Probably with multi-second TRs etc we simply did not care enough. heh heh
Summary
I am working on a method to synchronize physio data from either BioPac or Labchart with BIDS-format scan data in order to convert the physio data to BIDS format (see physiopy/phys2bids#219). This requires sub-second acquisition timing information from the scan data. At the moment, I use the
AcquisitionTime
field heudiconv retains in the json files, but I think that the scans.tsv file would be easier to access. The only unfortunate thing is that, in the conversion, sub-second timing information is discarded. See below:heudiconv/heudiconv/bids.py
Lines 407 to 411 in 5681e0d
If that information could be retained, it would make it easier to synchronize the scans with externally-acquired data, including physio.
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