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I've been using mrtrix3 to process my diffusion data in the past few months and it seems to provide good results.
I was wondering if it might be beneficial to provide a mrtrix3-based pipeline in dMRIPrep?
I know that several functions of mrtrix3 actually serve as wrappers for FSL functions (like dwifslpreproc), but some preprocessing tools that are available in mrtrix3 aren't in FSL (like MP-PCA denoising, Gibbs de-ringing, etc.).
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Hi all,
I've been using mrtrix3 to process my diffusion data in the past few months and it seems to provide good results.
I was wondering if it might be beneficial to provide a mrtrix3-based pipeline in dMRIPrep?
I know that several functions of mrtrix3 actually serve as wrappers for FSL functions (like dwifslpreproc), but some preprocessing tools that are available in mrtrix3 aren't in FSL (like MP-PCA denoising, Gibbs de-ringing, etc.).
Would love your inputs on this matter!
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