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new module idea: Power Analysis #33

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jaybee84 opened this issue Jun 30, 2020 · 3 comments
Open

new module idea: Power Analysis #33

jaybee84 opened this issue Jun 30, 2020 · 3 comments
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enhancement New feature or request

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@jaybee84
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Predict how many samples you need for your next RNA seq experiment using available data for estimation of variance in genes for different tumortypes

User controls 1. gene, 2. tumorType, 3. isCellLine, 4. assay(bulk/sc)

slider control: magnitude of change expected

output: variance in data, number of samples required (ideal, minimum)
@allaway
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allaway commented Jun 30, 2020

Cool idea! I wonder why you're thinking about this right now... :)

@jaybee84
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you got it!

@jaybee84 jaybee84 added the enhancement New feature or request label Jul 1, 2020
@allaway
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allaway commented Nov 30, 2020

Question: are there tools that do this already? this does not seem to be a disease-specific question/analysis, but I could be wrong.

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@jaybee84 @allaway