diff --git a/README.md b/README.md index 91b361e82..9b6b60890 100644 --- a/README.md +++ b/README.md @@ -62,6 +62,7 @@ Depending on the options and samples provided, the pipeline can currently perfor - `Strelka2` - `TIDDIT` - `Lofreq` +- Post-variant calling options (`BCFtools concat` for germline vcfs, `BCFtools norm` for all vcfs) - Variant filtering and annotation (`SnpEff`, `Ensembl VEP`, `BCFtools annotate`) - Summarise and represent QC (`MultiQC`)