diff --git a/modules.json b/modules.json index 61053db83..b4b52d15d 100644 --- a/modules.json +++ b/modules.json @@ -127,6 +127,11 @@ "git_sha": "89e06f63c5ee7abe5d6910277aff8e83b00a8b50", "installed_by": ["modules"] }, + "deepsomatic": { + "branch": "master", + "git_sha": "89e06f63c5ee7abe5d6910277aff8e83b00a8b50", + "installed_by": ["modules"] + }, "deepvariant": { "branch": "master", "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1", diff --git a/modules/nf-core/deepsomatic/tests/main.nf.test.snap b/modules/nf-core/deepsomatic/tests/main.nf.test.snap index 9e693386d..1a7886ec9 100644 --- a/modules/nf-core/deepsomatic/tests/main.nf.test.snap +++ b/modules/nf-core/deepsomatic/tests/main.nf.test.snap @@ -1,48 +1,20 @@ { - "sarscov2 - bam - stub": { + "tumor_normal_pair": { "content": [ - { - "0": [ - - ], - "1": [ - - ], - "bam": [ - - ], - "versions": [ - - ] - } + [ + "tumor_vs_normal_out.vcf.gz" + ], + [ + + ], + [ + "versions.yml:md5,d64cbd049771dd1a8d0885499ea16f11" + ] ], "meta": { "nf-test": "0.9.0", "nextflow": "24.04.3" }, - "timestamp": "2024-08-21T17:53:00.524660985" - }, - "sarscov2 - bam": { - "content": [ - { - "0": [ - - ], - "1": [ - - ], - "bam": [ - - ], - "versions": [ - - ] - } - ], - "meta": { - "nf-test": "0.9.0", - "nextflow": "24.04.3" - }, - "timestamp": "2024-08-21T17:52:54.704070521" + "timestamp": "2024-10-22T21:52:00.932502018" } } \ No newline at end of file