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Back to dev #1398

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Oct 8, 2024
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Back to dev #1398

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8af71e7
nf-core pipelines bump-version 3.17.0dev
maxulysse Oct 8, 2024
26901ea
Bump version in CHANGELOG
maxulysse Oct 8, 2024
3d00806
Bump versions in snap
maxulysse Oct 8, 2024
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14 changes: 14 additions & 0 deletions CHANGELOG.md
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## dev

### Credits

### Enhancements & fixes

- [PR #1398](https://github.com/nf-core/rnaseq/pull/1398) - Bump pipeline version to 3.17.0dev

### Parameters

### Software dependencies

## [[3.16.0](https://github.com/nf-core/rnaseq/releases/tag/3.16.0)] - 2024-10-02

### Credits
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| | `--bracken_precision` |

> **NB:** Parameter has been **updated** if both old and new parameter information is present.
>
> **NB:** Parameter has been **added** if just the new parameter information is present.
>
> **NB:** Parameter has been **removed** if new parameter information isn't present.

### Software dependencies
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -345,7 +345,7 @@ manifest {
description = """RNA sequencing analysis pipeline for gene/isoform quantification and extensive quality control."""
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '3.16.0'
version = '3.17.0dev'
doi = 'https://doi.org/10.5281/zenodo.1400710'
}

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4 changes: 2 additions & 2 deletions tests/default.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/featurecounts_group_type.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/hisat2.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/kallisto.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/min_mapped_reads.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/remove_ribo_rna.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/salmon.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/skip_qc.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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2 changes: 1 addition & 1 deletion tests/skip_trimming.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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4 changes: 2 additions & 2 deletions tests/star_rsem.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.16.0"
"nf-core/rnaseq": "v3.17.0dev"
}
},
[
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2 changes: 1 addition & 1 deletion workflows/rnaseq/assets/multiqc/multiqc_config.yml
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report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/rnaseq/releases/tag/3.16.0" target="_blank">nf-core/rnaseq</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/rnaseq/3.16.0/docs/output" target="_blank">documentation</a>.
This report has been generated by the <a href="https://github.com/nf-core/rnaseq/tree/dev" target="_blank">nf-core/rnaseq</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/rnaseq/dev/docs/output" target="_blank">documentation</a>.
report_section_order:
# Important checks and failures
sample-status:
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