Merge pull request #1186 from maxulysse/dev

update qualimap/rnaseq
nf-core · Jan 10, 2024 · c591bf6 · c591bf6
2 parents 5babec3 + 52f93cb
commit c591bf6
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Showing 6 changed files with 14 additions and 23 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -9,6 +9,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Enhancements & fixes
 
+- [PR #1186](https://github.com/nf-core/rnaseq/pull/1186) - Properly update qualimap/rnaseq module (ie not patch)
+
 ### Parameters
 
 ### Software dependencies

diff --git a/modules.json b/modules.json
@@ -90,9 +90,8 @@
                     },
                     "qualimap/rnaseq": {
                         "branch": "master",
-                        "git_sha": "4657d98bc9f565e067c4d924126ce107056f5e2f",
-                        "installed_by": ["modules"],
-                        "patch": "modules/nf-core/qualimap/rnaseq/qualimap-rnaseq.diff"
+                        "git_sha": "3902a0cfeb7a4bc12872371d1bea93aba692243b",
+                        "installed_by": ["modules"]
                     },
                     "rsem/calculateexpression": {
                         "branch": "master",

diff --git a/modules/nf-core/qualimap/rnaseq/environment.yml b/modules/nf-core/qualimap/rnaseq/environment.yml
diff --git a/modules/nf-core/qualimap/rnaseq/main.nf b/modules/nf-core/qualimap/rnaseq/main.nf
diff --git a/modules/nf-core/qualimap/rnaseq/meta.yml b/modules/nf-core/qualimap/rnaseq/meta.yml
diff --git a/modules/nf-core/qualimap/rnaseq/qualimap-rnaseq.diff b/modules/nf-core/qualimap/rnaseq/qualimap-rnaseq.diff