-
Notifications
You must be signed in to change notification settings - Fork 695
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
[FEATURE] Fix bioconda recipe for deepvariant #1754
Comments
Hi @maxulysse As some background work for nf-core/sarek#394 I had a look at the deepvariant container available in biocontainers and conda, however they don't bundle the For the purpose of the module, I'm relying on Google's container for deepvariant and once the module design is finalized, I'll try to accomodate those changes in |
Hey @abhi18av ! What is the status here? |
Hi @FriederikeHanssen , This is a tough nut, I have initiated an issue on the bioconda side bioconda/bioconda-recipes#30310 and taken a stab at the recipe here https://github.com/bioconda/bioconda-recipes/pull/30311/files, however I found the build script to be a bit convoluted and contacted the core authors through the issue. Haven't heard back from them regarding the inclusion of |
ok, then let's leave this issue open :) Thank you, I tried to clean up a bit before tomorrow |
Should we move this issue to modules? Not exactly a sarek related one |
Latest release is
1.1.0
.Latest available on bioconda is:
1.0.0
The text was updated successfully, but these errors were encountered: