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When I tried to download some sralite files and transfer it into the fasta files, looks like due to the version of sra-tools version 2.11.0 which is too old, I could not use that to make the fastq files. Based on the reference https://www.ncbi.nlm.nih.gov/sra/docs/sra-data-formats/, is that possible to update the sra-tools version in process SRATOOLS_FASTERQDUMP into higher version (at least over 2.11.2) to make the function of change sralite into fastq become available?
drpatelh
changed the title
The sralite files could not be transfer into the fastq files due to sra-tools version
Add compatibility for sralite files
Oct 6, 2023
Description of the bug
Hi,
When I tried to download some sralite files and transfer it into the fasta files, looks like due to the version of sra-tools version 2.11.0 which is too old, I could not use that to make the fastq files. Based on the reference https://www.ncbi.nlm.nih.gov/sra/docs/sra-data-formats/, is that possible to update the sra-tools version in
process SRATOOLS_FASTERQDUMP
into higher version (at least over 2.11.2) to make the function of change sralite into fastq become available?Command used and terminal output
Relevant files
No response
System information
No response
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