Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Implement mapDamage2 for base rescaling #583

Closed
marcel-keller opened this issue Oct 20, 2020 · 1 comment · Fixed by #642
Closed

Implement mapDamage2 for base rescaling #583

marcel-keller opened this issue Oct 20, 2020 · 1 comment · Fixed by #642
Labels
enhancement New feature or request
Milestone
2.3 "Aalen"

Comments

@marcel-keller
Copy link
Contributor

Please implement mapdamage2 as an alternative to damageprofiler, since only mapdamage offers base quality rescaling (--rescale) of damage which is commonly done for nonUDG ancient DNA data.
@jfy133 jfy133 changed the title implement mapdamage2 for base rescaling Implement mapDamage2 for base rescaling Oct 20, 2020
@jfy133 jfy133 added the enhancement New feature or request label Oct 20, 2020
@jfy133 jfy133 added this to the V2.3 "Wangen" milestone Oct 20, 2020
@jfy133 jfy133 modified the milestones: 2.4 "Wangen", 2.3 "Geislingen" Dec 22, 2020
@jfy133
Copy link
Member

jfy133 commented Dec 22, 2020

Also requested by reviewer, bumping to next release!

@jfy133 jfy133 mentioned this issue Dec 22, 2020
Merged
11 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
2.3 "Aalen"
Development

Successfully merging a pull request may close this issue.

Add Damage rescaling functionality jfy133/nf-core-eager
3 participants
@apeltzer @jfy133 @marcel-keller