modules.json

{
    "name": "nf-core/denovotranscript",
    "homePage": "https://github.com/nf-core/denovotranscript",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "busco/busco": {
                        "branch": "master",
                        "git_sha": "17486961b8b1ab1aae258c83a7e947b40d8ab670",
                        "installed_by": ["modules"]
                    },
                    "cat/cat": {
                        "branch": "master",
                        "git_sha": "9437e6053dccf4aafa022bfd6e7e9de67e625af8",
                        "installed_by": ["modules"]
                    },
                    "cat/fastq": {
                        "branch": "master",
                        "git_sha": "4fc983ad0b30e6e32696fa7d980c76c7bfe1c03e",
                        "installed_by": ["modules"]
                    },
                    "evigene/tr2aacds": {
                        "branch": "master",
                        "git_sha": "95d52841a6e2c6cd789dfd7248ac12a0fe4b5501",
                        "installed_by": ["modules"]
                    },
                    "fastp": {
                        "branch": "master",
                        "git_sha": "95cf5fe0194c7bf5cb0e3027a2eb7e7c89385080",
                        "installed_by": ["fastq_trim_fastp_fastqc", "modules"]
                    },
                    "fastqc": {
                        "branch": "master",
                        "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
                        "installed_by": ["fastq_trim_fastp_fastqc", "modules"]
                    },
                    "gawk": {
                        "branch": "master",
                        "git_sha": "cf3ed075695639b0a0924eb0901146df1996dc08",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "cf17ca47590cc578dfb47db1c2a44ef86f89976d",
                        "installed_by": ["modules"]
                    },
                    "salmon/index": {
                        "branch": "master",
                        "git_sha": "cb6b2b94fc40dea58f0b1e3dd095f3dd24f2ac8a",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/salmon/index/salmon-index.diff"
                    },
                    "salmon/quant": {
                        "branch": "master",
                        "git_sha": "727232afb8294b53dd9d05bfe469b70cce1675bb",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/salmon/quant/salmon-quant.diff"
                    },
                    "sortmerna": {
                        "branch": "master",
                        "git_sha": "ad22467dff16284093e7335d5e77964e9bbc510b",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/sortmerna/sortmerna.diff"
                    },
                    "spades": {
                        "branch": "master",
                        "git_sha": "b3f04d8392f4571d5869eb3a345892dd2cbea225",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/spades/spades.diff"
                    },
                    "trinity": {
                        "branch": "master",
                        "git_sha": "05a2da2a077047c9d637bb71626c65b7e4fc04c3",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "fastq_trim_fastp_fastqc": {
                        "branch": "master",
                        "git_sha": "cfd937a668919d948f6fcbf4218e79de50c2f36f",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "3aa0aec1d52d492fe241919f0c6100ebf0074082",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "1b6b9a3338d011367137808b49b923515080e3ba",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "bbd5a41f4535a8defafe6080e00ea74c45f4f96c",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}