From 680b08dd7f686b6566772420dafd9067886f24b0 Mon Sep 17 00:00:00 2001 From: Adrien Coulier Date: Tue, 27 Feb 2024 16:38:21 +0100 Subject: [PATCH] Bump version to 1.5.0dev --- assets/multiqc_config.yml | 4 ++-- nextflow.config | 2 +- tests/pipeline/bases2fastq.nf.test.snap | 2 +- tests/pipeline/bcl2fastq.nf.test.snap | 2 +- tests/pipeline/bclconvert.nf.test.snap | 2 +- tests/pipeline/fqtk.nf.test.snap | 2 +- tests/pipeline/sgdemux.nf.test.snap | 2 +- tests/pipeline/skip_tools.nf.test.snap | 10 +++++----- 8 files changed, 13 insertions(+), 13 deletions(-) diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index e6fb7c9b..3dab57ad 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,7 +1,7 @@ report_comment: > - This report has been generated by the nf-core/demultiplex + This report has been generated by the nf-core/demultiplex analysis pipeline. For information about how to interpret these results, please see the - documentation. + documentation. report_section_order: "nf-core-demultiplex-methods-description": order: -1000 diff --git a/nextflow.config b/nextflow.config index 5c11d163..fd496c88 100755 --- a/nextflow.config +++ b/nextflow.config @@ -244,7 +244,7 @@ manifest { description = """Demultiplexing pipeline for Illumina sequencing data""" mainScript = 'main.nf' nextflowVersion = '!>=23.04.0' - version = '1.4.1' + version = '1.5.0dev' doi = '10.5281/zenodo.7153103' } diff --git a/tests/pipeline/bases2fastq.nf.test.snap b/tests/pipeline/bases2fastq.nf.test.snap index 1799cd22..81860014 100644 --- a/tests/pipeline/bases2fastq.nf.test.snap +++ b/tests/pipeline/bases2fastq.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions": { "content": [ - "{BASES2FASTQ={bases2fastq=1.1.0.593880262, use subject to license available at elementbiosciences.com}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BASES2FASTQ={bases2fastq=1.1.0.593880262, use subject to license available at elementbiosciences.com}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:35:40.754431" }, diff --git a/tests/pipeline/bcl2fastq.nf.test.snap b/tests/pipeline/bcl2fastq.nf.test.snap index 9309e106..ac3f10d2 100644 --- a/tests/pipeline/bcl2fastq.nf.test.snap +++ b/tests/pipeline/bcl2fastq.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions": { "content": [ - "{BCL2FASTQ={bcl2fastq=2.20.0.422}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCL2FASTQ={bcl2fastq=2.20.0.422}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:33:22.381185" }, diff --git a/tests/pipeline/bclconvert.nf.test.snap b/tests/pipeline/bclconvert.nf.test.snap index 7e243aab..0072724f 100644 --- a/tests/pipeline/bclconvert.nf.test.snap +++ b/tests/pipeline/bclconvert.nf.test.snap @@ -24,7 +24,7 @@ }, "software_versions": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:34:45.479857" }, diff --git a/tests/pipeline/fqtk.nf.test.snap b/tests/pipeline/fqtk.nf.test.snap index 30f6c888..e99f6c28 100644 --- a/tests/pipeline/fqtk.nf.test.snap +++ b/tests/pipeline/fqtk.nf.test.snap @@ -7,7 +7,7 @@ }, "software_versions": { "content": [ - "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.4.1}}" + "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:44:27.866672" } diff --git a/tests/pipeline/sgdemux.nf.test.snap b/tests/pipeline/sgdemux.nf.test.snap index 5ea15ecf..29f3f0d7 100644 --- a/tests/pipeline/sgdemux.nf.test.snap +++ b/tests/pipeline/sgdemux.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions": { "content": [ - "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, SGDEMUX={sgdemux=1.1.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.4.1}}" + "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, SGDEMUX={sgdemux=1.1.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:37:21.248788" }, diff --git a/tests/pipeline/skip_tools.nf.test.snap b/tests/pipeline/skip_tools.nf.test.snap index 7eb22635..fc9ee25e 100644 --- a/tests/pipeline/skip_tools.nf.test.snap +++ b/tests/pipeline/skip_tools.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions_skip_trimming": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:38:37.024188" }, @@ -95,25 +95,25 @@ }, "software_versions_skip_fastqc": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:40:31.135957" }, "software_versions_skip_fastp_fastqc": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:41:03.9175" }, "software_versions_skip_multiqc": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:42:24.103372" }, "software_versions_skip_fastp": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.1}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.7}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.7, yaml=5.4.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2024-02-02T13:39:08.036992" },