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consensus_peaks.mLb.clN.boolean.intersect.plot.pdf not generated #71

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FriederikeHanssen opened this issue Dec 17, 2019 · 1 comment
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consensus_peaks.mLb.clN.boolean.intersect.plot.pdf not generated #71

FriederikeHanssen opened this issue Dec 17, 2019 · 1 comment
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FriederikeHanssen commented Dec 17, 2019 •
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consensus_peaks.mLb.clN.boolean.intersect.txt.zip

When running the pipeline with a large number of samples (here: 88), the file consensus_peaks.mLb.clN.boolean.intersect.plot.pdf has 0 bytes in process MergedLibConsensusPeakSet. Commenting out this line should circumvent the issue for now.
@drpatelh drpatelh added the bug Something isn't working label Jan 20, 2020
This was referenced Feb 24, 2020
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drpatelh commented Feb 24, 2020 •
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Fixed in #84

Had to change bin/plot_peak_intersect.r to only use top 70 intersects for larger datasets.

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