Update sbdi-gtdb to point to the latest

nf-core · Jun 18, 2024 · 92f7fda · 92f7fda
1 parent 09207bf
commit 92f7fda
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/conf/ref_databases.config b/conf/ref_databases.config
@@ -123,11 +123,11 @@ params {
             dbversion = "RDP 18/11.5 (https://zenodo.org/record/4310151/)"
         }
         'sbdi-gtdb' {
-            title = "SBDI-GTDB - Sativa curated 16S GTDB database - Release R07-RS207-1"
-            file = [ "https://scilifelab.figshare.com/ndownloader/files/36980767", "https://scilifelab.figshare.com/ndownloader/files/36980788" ]
-            citation = "Lundin D, Andersson A. SBDI Sativa curated 16S GTDB database. FigShare. doi: 10.17044/scilifelab.14869077.v4"
+            title = "SBDI-GTDB - Sativa curated 16S GTDB database - Release R08-RS214-1"
+            file = [ "https://figshare.scilifelab.se/ndownloader/files/45818841", "https://figshare.scilifelab.se/ndownloader/files/45818850" ]
+            citation = "Lundin D, Andersson A. SBDI Sativa curated 16S GTDB database. FigShare. doi: 10.17044/scilifelab.14869077.v6"
             fmtscript = "taxref_reformat_sbdi-gtdb.sh"
-            dbversion = "SBDI-GTDB-R07-RS207-1 (https://scilifelab.figshare.com/articles/dataset/SBDI_Sativa_curated_16S_GTDB_database/14869077/4)"
+            dbversion = "SBDI-GTDB-R08-RS214-1 (https://figshare.scilifelab.se/articles/dataset/SBDI_Sativa_curated_16S_GTDB_database/14869077/6)"
             taxlevels = "Domain,Kingdom,Phylum,Class,Order,Family,Genus,Species"
         }
         'sbdi-gtdb=R08-RS214-1' {