Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

add .db merge python directive to run_snakefile.sh #88

Open
DininduSenanayake opened this issue Nov 5, 2024 · 0 comments
Open

add .db merge python directive to run_snakefile.sh #88

DininduSenanayake opened this issue Nov 5, 2024 · 0 comments
Assignees
@Ollehar

Comments

@DininduSenanayake
Copy link
Collaborator

Current implementation of the workflow will leave the .db files generated for each set in PASSED_DB directory. Will have to merge them either within the same directory OR

  • Created a FINAL_DB directory on the working directory, move all of the .db files each of the PASSED_DB directories to FINAL_DB
  • Then run the Python script to merge
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@Ollehar Ollehar

Labels
None yet
Projects
APSIM-HPC
Status: Backlog
Milestone
No milestone
Development

No branches or pull requests
2 participants
@DininduSenanayake @Ollehar