diff --git a/man/neuprint_find_neurons.Rd b/man/neuprint_find_neurons.Rd index 22c14e8f..9616eba6 100644 --- a/man/neuprint_find_neurons.Rd +++ b/man/neuprint_find_neurons.Rd @@ -56,6 +56,10 @@ pncands=neuprint_find_neurons(input_ROIs = "AL(R)", output_ROIs = "LH(R)") head(pncands) plot(`LH(R).pre`~`AL(R).post`, data=pncands) } +\donttest{ +lhr=neuprint_bodies_in_ROI('LH(R)') +head(lhr) +} } \seealso{ \code{\link{neuprint_fetch_custom}}, \code{\link{neuprint_simple_connectivity}}, \code{\link{neuprint_common_connectivity}} diff --git a/man/neuprint_search.Rd b/man/neuprint_search.Rd index 8d5b0048..ec9d1cb4 100644 --- a/man/neuprint_search.Rd +++ b/man/neuprint_search.Rd @@ -7,6 +7,7 @@ neuprint_search( search, field = "name", + fixed = FALSE, meta = TRUE, all_segments = FALSE, dataset = NULL, @@ -21,6 +22,11 @@ neuprint_search( Defaults to name (or instance, as handled by \code{neuprintr:::neuprint_name_field}). Other common options include type, status, cellBodyFiber etc.} +\item{fixed}{if FALSE (the default), \code{search} is interpreted as a regular expression +("Advanced input" in neuprint explorer). If TRUE, the string \code{search} is interpreted as +a simple character string (the default search behavior in neuprint explorer) to be matched +(partial matches are fine)} + \item{meta}{if TRUE, meta data for found bodyids is also pulled} \item{all_segments}{if TRUE, all bodies are considered, if FALSE, only @@ -51,6 +57,7 @@ neuprint_search(".*DA2.*") neuprint_search("MBON.*") neuprint_search("MBON.*",field = "type") neuprint_search("AVF1",field = "cellBodyFiber") +neuprint_search("PEN_a(PEN1)",field="type",fixed=TRUE) } } \seealso{