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1. uci-cbcl/esm-efficient uci-cbcl/esm-efficient Public

   Efficient implementatin of ESM family.

   Python 37 3

2. uci-cbcl/EpiOut uci-cbcl/EpiOut Public

   A statistical method to detect, analyze and visualize aberrations in chromatin accessibility (ATAC-seq, DNase-Seq) and quantify its effect on gene expression.

   Python 2

3. gagneurlab/MMSplice_MTSplice gagneurlab/MMSplice_MTSplice Public

   Tissue-specific variant effect predictions on splicing

   Jupyter Notebook 40 21

4. figure_panel figure_panel Public

   Python 3 1

5. kipoi/kipoiseq kipoi/kipoiseq Public

   Standard set of data-loaders for training and making predictions for DNA sequence-based models.

   Python 77 13

6. betabinomial betabinomial Public

   Beta-Binomial for testing count data

   Python 3