[docs] store uvtable.txt and fix urls #38
Workflow file for this run
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| name: tests and docs | |
| # branch filtering: | |
| # https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions#filter-pattern-cheat-sheet | |
| # workflows running on Linux and MacOS have passwordless sudo rights: | |
| # https://stackoverflow.com/questions/57982945/how-to-apt-get-install-in-a-github-actions-workflow | |
| on: push | |
| jobs: | |
| test: | |
| name: Run Unit Tests | |
| runs-on: ubuntu-20.04 | |
| defaults: | |
| run: | |
| # pinning the shell name helps to properly set conda | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| python-version: [ 3.6, 3.7, 3.8, 3.9 ] | |
| env: | |
| OMP_NUM_THREADS: 2 | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| - name: Setup conda for Python ${{ matrix.python-version }} | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: test | |
| python-version: ${{ matrix.python-version }} | |
| channels: conda-forge | |
| allow-softlinks: true | |
| channel-priority: flexible | |
| show-channel-urls: true | |
| use-only-tar-bz2: true | |
| - name: Print conda config | |
| run: | | |
| conda info | |
| conda list | |
| conda config --show-sources | |
| conda config --show | |
| - name: Install FFTW3 | |
| run: sudo apt-get install libfftw3-dev | |
| - name: Build and install galario, build docs | |
| run: | | |
| conda activate test | |
| conda install astropy cython nomkl numpy pytest scipy sphinx | |
| pip install coverage codecov pytest-cov | |
| mkdir build && cd build | |
| cmake -DCMAKE_INSTALL_PREFIX=/tmp -DCMAKE_PREFIX_PATH=${CONDA_PREFIX} .. | |
| make | |
| make install | |
| - name: Run unit tests | |
| run: python/py.test.sh -sv --cov=./ python/test_galario.py | |
| working-directory: build | |
| - name: Upload code coverage report | |
| run: bash <(curl -s https://codecov.io/bash) || echo 'Codecov failed to upload' | |
| - name: build docs | |
| run: | | |
| conda activate test | |
| pip install sphinx_py3doc_enhanced_theme sphinxcontrib-fulltoc | |
| cd build | |
| make docs | |
| - name: deploy docs | |
| if: github.ref == 'refs/heads/master' && matrix.python-version == '3.7' | |
| uses: JamesIves/[email protected] | |
| with: | |
| branch: gh-pages # The branch the action should deploy to. | |
| folder: build/docs/html # The folder the action should deploy. | |
| dry-run: false |