From 0181e9379c223a73d11b8b5434b82fc59e52c4d0 Mon Sep 17 00:00:00 2001 From: moi-taiga Date: Thu, 7 Mar 2024 15:04:45 +0000 Subject: [PATCH] Install Bug Chasing --- DESCRIPTION | 2 +- NAMESPACE | 4 -- R/gss_flatten_cell_frequencies_moi.R | 2 - docs/404.html | 11 ++--- docs/LICENSE-text.html | 7 ++-- docs/LICENSE.html | 9 ++-- docs/authors.html | 26 ++++++------ docs/index.html | 17 ++++---- docs/pkgdown.yml | 3 +- docs/reference/index.html | 62 ++++++++++++++++++++++++++-- man/ppr_output_plot.Rd | 15 ++++++- man/ppr_predict_position.Rd | 11 ++++- man/ppr_timeline_plot.Rd | 25 ++++++++++- 13 files changed, 148 insertions(+), 46 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 9a434e2..033afff 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -9,7 +9,7 @@ Description: This package identifies the progression of a sample on a trajectory License: GPL-3 + file LICENSE Encoding: UTF-8 LazyData: true -RoxygenNote: 7.2.3 +RoxygenNote: 7.3.1 URL: https://github.com/moi-taiga/PathPinpointR, https://moi-taiga.github.io/PathPinpointR/ BugReports: https://github.com/moi-taiga/PathPinpointR/issues diff --git a/NAMESPACE b/NAMESPACE index 1d61b25..ba5b50b 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -2,16 +2,12 @@ S3method(print,PPR_OBJECT) export(filter_gene_expression_for_switching_genes) -export(flatten_cell_frequencies_moi) -export(flatten_cell_frequencies_owen) -export(gss_plot_cell_range) export(ppr_accuracy_test) export(ppr_cell_plot) export(ppr_output_plot) export(ppr_precision) export(ppr_predict_position) export(ppr_timeline_plot) -export(select_evenly_distributed_switching_genes) import(ggplot2) import(ggrepel) importFrom(ggplot2,ggplot) diff --git a/R/gss_flatten_cell_frequencies_moi.R b/R/gss_flatten_cell_frequencies_moi.R index e8be03f..deb1183 100644 --- a/R/gss_flatten_cell_frequencies_moi.R +++ b/R/gss_flatten_cell_frequencies_moi.R @@ -1,5 +1,3 @@ -#' #' Title flatten_cell_frequencies_moi -#' #' #' #' @description #' #' Combining all cells racing lines with out binerization (Moi's way). #' #' diff --git a/docs/404.html b/docs/404.html index 88186a7..892f7a1 100644 --- a/docs/404.html +++ b/docs/404.html @@ -5,10 +5,10 @@ -Page not found (404) • PathPinPointR +Page not found (404) • PathPinpointR - - + + License • PathPinPointRLicense • PathPinpointR @@ -8,7 +8,7 @@