Name		Name	Last commit message	Last commit date
parent directory ..
experimental		experimental
scripts		scripts
validation		validation
README.md		README.md
create_mobie_htm_project.ipynb		create_mobie_htm_project.ipynb
create_mobie_project.ipynb		create_mobie_project.ipynb
create_spatial_transcriptomics_project.ipynb		create_spatial_transcriptomics_project.ipynb
project_from_ome_zarr_s3.py		project_from_ome_zarr_s3.py

README.md

MoBIE python examples

This folder contains notebooks that demonstrate the usage of the MoBIE python library. Currently, we have the following two example notebooks:

create_mobie_project: generate a MoBIE project for multi-modal data from a CLEM experiment
create_mobie_htm_project: generate a MoBIE project for high-throughput microscopy from a imaging based SARS-CoV-2 antibody assay.
create_spatial_transcriptomics_project: create a MoBIE project for spatial transcriptomics data