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dags.qmd
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dags.qmd
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# Directed Acyclic Graphs (DAGs) {.unnumbered}
```{r}
#| label: setup
#| message: false
#| warning: false
#| include: false
library(tidyverse)
library(lubridate)
library(scales)
library(knitr)
library(kableExtra)
library(colorblindr)
library(downlit)
# fonts ----
library(extrafont)
library(sysfonts)
source("_common.R")
# use font
showtext::showtext_auto()
# set theme
ggplot2::theme_set(theme_ggp2g(
base_size = 15))
```
```{r}
#| label: status
#| results: "asis"
#| echo: false
# status ----
# polish, dev, draft, complete
status("draft")
```
:::: {.callout-note collapse="false" icon=false}
## Graph overview
::: {style="font-size: 1.25em; color: #02577A;"}
:::
<br>
```{r}
#| label: full_code_display
#| eval: true
#| echo: false
#| warning: false
#| message: false
#| out-height: '60%'
#| out-width: '60%'
#| fig-align: right
library(palmerpenguins)
library(ggplot2movies)
library(fivethirtyeight)
library(ggplot2)
df <- tibble::tibble(X = sample(x = 1:100, 10, FALSE),
Y = rlnorm(10, 1, 3))
labs_graph <- ggplot2::labs(title = "Title",
subtitle = "subtitle",
x = "X", y = "Y")
ggp2_graph <- ggplot2::ggplot(data = df,
mapping = aes(x = X, y = Y)) +
ggplot2::geom_blank()
ggp2_graph +
labs_graph
```
::: {style="font-size: 1.10em; color: #02577A;"}
**This graph requires:**
:::
::: {style="font-size: 1.05em; color: #282b2d;"}
**`r emo::ji("check")` a categorical variable**
:::
::: {style="font-size: 1.05em; color: #282b2d;"}
**`r emo::ji("check")` a numeric (continuous) variable**
:::
::::
## Description
Description of graph aesthetics, appropriate use, similar graphs, etc.
## Set up
::: {style="font-size: 1.15em; color: #1e83c8;"}
**PACKAGES:**
:::
::: {style="font-size: 0.95rem;"}
Install packages.
:::
::: {style="font-size: 0.85em;"}
```{r}
#| label: pkg_code_dags
#| eval: true
#| echo: true
#| warning: false
#| message: false
#| results: hide
install.packages("palmerpenguins")
library(palmerpenguins)
library(ggplot2)
```
:::
::: {style="font-size: 1.15em; color: #1e83c8;"}
**DATA:**
:::
<!--
::: {.column-margin}
{fig-align="right" width="30%" height="30%"}
{fig-align="right" width="15%" height="15%"}
{fig-align="right" width="20%" height="20%"}
:::
-->
::: {style="font-size: 0.95rem;"}
<!-- Description of data -->
:::
::: {style="font-size: 0.85em;"}
```{r}
#| label: data_code_dags
#| eval: true
#| echo: true
df <- tibble::tibble(X = sample(x = 1:100, 10, FALSE),
Y = rlnorm(10, 1, 3))
dplyr::glimpse(df)
```
:::
::::
## Grammar
::: {style="font-size: 1.15em; color: #1e83c8;"}
**CODE:**
:::
::: {style="font-size: 0.95rem;"}
Create labels with `labs()`
Initialize the graph with `ggplot()` and provide `data`
:::
::: {style="font-size: 0.85em;"}
```{r}
#| label: code_graph_dags
#| eval: false
#| echo: true
#| warning: false
#| message: false
#| out-height: '100%'
#| out-width: '100%'
#| column: page-inset-right
#| layout-nrow: 1
labs_graph <- ggplot2::labs(title = "Title",
subtitle = "subtitle",
x = "X", y = "Y")
ggp2_graph <- ggplot2::ggplot(data = df,
mapping = aes(x = X, y = Y)) +
ggplot2::geom_blank()
ggp2_graph +
labs_graph
```
:::
:::: {.column-margin}
::: {style="font-size: 0.80em; color: #02577A;"}
More description of graph and code.
:::
::::
::: {style="font-size: 1.15em; color: #1e83c8;"}
**GRAPH:**
:::
```{r}
#| label: create_graph_dags
#| eval: true
#| echo: false
#| warning: false
#| message: false
#| out-height: '100%'
#| out-width: '100%'
#| column: page-inset-right
#| layout-nrow: 1
labs_graph <- ggplot2::labs(title = "Title",
subtitle = "subtitle",
x = "X", y = "Y")
ggp2_graph <- ggplot2::ggplot(data = df,
mapping = aes(x = X, y = Y)) +
ggplot2::geom_blank()
ggp2_graph +
labs_graph
```
::::
## More info
### Info
:::: {.column-margin}
::: {style="font-size: 0.80em; color: #02577A;"}
Info
:::
::::
::: {style="font-size: 1.15em; color: #1e83c8;"}
**INFO:**
:::
::: {style="font-size: 0.95rem;"}
:::
::: {style="font-size: 0.85em;"}
```{r}
#| label: more_info_1_dags
#| code-fold: true
#| eval: true
#| echo: true
#| warning: false
#| message: false
#| out-height: '100%'
#| out-width: '100%'
#| column: page-inset-right
#| layout-nrow: 1
```
:::
### More
::: {style="font-size: 1.15em; color: #1e83c8;"}
**MORE:**
:::
::: {style="font-size: 0.95rem;"}
:::
::: {style="font-size: 0.85em;"}
```{r}
#| label: more_info_2_dags
#| code-fold: true
#| eval: true
#| echo: true
#| warning: false
#| message: false
#| out-height: '100%'
#| out-width: '100%'
#| column: page-inset-right
#| layout-nrow: 1
```
:::
::::