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1.2.3 (2023-10-02)

🏠 Internal

  • Add [extras] extras_require with datalad-metalad and add all those extras to [devel]. PR #215 (by @yarikoptic)

  • Robustify installation of singularity (install libfuse2). PR #221 (by @yarikoptic)

1.2.2 (2023-08-09)

🐛 Bug Fixes

1.2.1 (2023-06-09)

🐛 Bug Fixes

  • Capture stderr as well while trying for singularity or apptainer to avoid spurious stderr display. PR #208 (by @yarikoptic)

  • BF: by default stop containers-run on error, to not proceed to save. PR #209 (by @yarikoptic)

1.2.0 (2023-05-25)

🚀 Enhancements and New Features

🐛 Bug Fixes

  • Make datalad_container.adapters.docker save assume latest if no image version given. Fixes #105 via PR #206 (by @jwodder)

🏠 Internal

1.1.9 (2023-02-06)

🏠 Internal

  • Fix the "bump" level for breaking changes in .datalad-release-action.yaml. PR #186 (by @jwodder)

  • Account for move of @eval_results in datalad core. PR #192 (by @yarikoptic)

  • scriv.ini: Provide full relative path to the templates. PR #193 (by @yarikoptic)

🧪 Tests

  • Install Singularity 3 from an official .deb, use newer ubuntu (jammy) on travis. PR #188 (by @bpoldrack)

1.1.8 (Mon Oct 10 2022)

🐛 Bug Fix

📝 Documentation

🧪 Tests

Authors: 2

1.1.7 (Tue Aug 30 2022)

🐛 Bug Fix

  • DOC: Set language in Sphinx config to en #178 (@adswa)

🧪 Tests

  • nose -> pytest, isort imports in tests, unify requirements-devel to correspond to the form as in core #179 (@yarikoptic)

Authors: 2

1.1.6 (Mon Apr 11 2022)

🐛 Bug Fix

⚠️ Pushed to master

  • Adjust test to acknowledge reckless behavior (@mih)
  • Slightly relax tests to account for upcoming remove() change (@mih)

📝 Documentation

Authors: 6

1.1.5 (Mon Jun 07 2021)

🐛 Bug Fix

  • BF: fix special remotes without "externaltype" #156 (@loj)

Authors: 1

  • Laura Waite (@loj)

1.1.4 (Mon Apr 19 2021)

🐛 Bug Fix

  • BF+RF: no need to pandoc long description for pypi + correctly boost MODULE/version.py for the release #152 (@yarikoptic)

Authors: 1

1.1.3 (Thu Apr 15 2021)

🐛 Bug Fix

  • Set up workflow with auto for releasing & PyPI uploads #151 (@yarikoptic)
  • TST: docker_adapter: Skip tests if 'docker pull' in setup fails #148 (@kyleam)

🏠 Internal

Authors: 2

1.1.2 (January 16, 2021) --

  • Replace use of mock with unittest.mock as we do no longer support Python 2

1.1.1 (January 03, 2021) --

  • Drop use of Runner (to be removed in datalad 0.14.0) in favor of WitlessRunner

1.1.0 (October 30, 2020) --

  • Datalad version 0.13.0 or later is now required.

  • In the upcoming 0.14.0 release of DataLad, the datalad special remote will have built-in support for "shub://" URLs. If containers-add detects support for this feature, it will now add the "shub://" URL as is rather than resolving the URL itself. This avoids registering short-lived URLs, allowing the image to be retrieved later with datalad get.

  • containers-run learned to install necessary subdatasets when asked to execute a container from underneath an uninstalled subdataset.

1.0.1 (June 23, 2020) --

  • Prefer datalad.core.local.run to datalad.interface.run. The latter has been marked as obsolete since DataLad v0.12 (our minimum requirement) and will be removed in DataLad's next feature release.

1.0.0 (Feb 23, 2020) -- not-as-a-shy-one

Extension is pretty stable so releasing as 1. MAJOR release, so we could start tracking API breakages and enhancements properly.

  • Drops support for Python 2 and DataLad prior 0.12

0.5.2 (Nov 12, 2019) --

Fixes

  • The Docker adapter unconditionally called docker run with --interactive and --tty even when stdin was not attached to a TTY, leading to an error.

0.5.1 (Nov 08, 2019) --

Fixes

  • The Docker adapter, which is used for the "dhub://" URL scheme, assumed the Python executable was spelled "python".

  • A call to DataLad's resolve_path helper assumed a string return value, which isn't true as of the latest DataLad release candidate, 0.12.0rc6.

0.5.0 (Jul 12, 2019) -- damn-you-malicious-users

New features

  • The default result renderer for containers-list is now a custom renderer that includes the container name in the output.

Fixes

  • Temporarily skip two tests relying on SingularityHub -- it is down.

0.4.0 (May 29, 2019) -- run-baby-run

The minimum required DataLad version is now 0.11.5.

New features

  • The call format gained the "{img_dspath}" placeholder, which expands to the relative path of the dataset that contains the image. This is useful for pointing to a wrapper script that is bundled in the same subdataset as a container.

  • containers-run now passes the container image to run via its extra_inputs argument so that a run command's "{inputs}" field is restricted to inputs that the caller explicitly specified.

  • During execution, containers-run now sets the environment variable DATALAD_CONTAINER_NAME to the name of the container.

Fixes

  • containers-run mishandled paths when called from a subdirectory.

  • containers-run didn't provide an informative error message when cmdexec contained an unknown placeholder.

  • containers-add ignores the --update flag when the container doesn't yet exist, but it confusingly still used the word "update" in the commit message.

0.3.1 (Mar 05, 2019) -- Upgrayeddd

Fixes

  • containers-list recursion actually does recursion.

0.3.0 (Mar 05, 2019) -- Upgrayedd

API changes

  • containers-list no longer lists containers from subdatasets by default. Specify --recursive to do so.

  • containers-run no longer considers subdataset containers in its automatic selection of a container name when no name is specified. If the current dataset has one container, that container is selected. Subdataset containers must always be explicitly specified.

New features

  • containers-add learned to update a previous container when passed --update.

  • containers-add now supports Singularity's "docker://" scheme in the URL.

  • To avoid unnecessary recursion into subdatasets, containers-run now decides to look for containers in subdatasets based on whether the name has a slash (which is true of all subdataset containers).

0.2.2 (Dec 19, 2018) -- The more the merrier

  • list/use containers recursively from installed subdatasets
  • Allow to specify container by path rather than just by name
  • Adding a container from local filesystem will copy it now

0.2.1 (Jul 14, 2018) -- Explicit lyrics

  • Add support datalad run --explicit.

0.2 (Jun 08, 2018) -- Docker

  • Initial support for adding and running Docker containers.
  • Add support datalad run --sidecar.
  • Simplify storage of call_fmt arguments in the Git config, by benefiting from datalad run being able to work with single-string compound commands.

0.1.2 (May 28, 2018) -- The docs

  • Basic beginner documentation

0.1.1 (May 22, 2018) -- The fixes

New features

  • Add container images straight from singularity-hub, no need to manually specify --call-fmt arguments.

API changes

  • Use "name" instead of "label" for referring to a container (e.g. containers-run -n ... instead of containers-run -l.

Fixes

  • Pass relative container path to datalad run.
  • containers-run no longer hides datalad run failures.

0.1 (May 19, 2018) -- The Release

  • Initial release with basic functionality to add, remove, and list containers in a dataset, plus a run command wrapper that injects the container image as an input dependency of a command call.