-
Notifications
You must be signed in to change notification settings - Fork 3.8k
/
test.sh
executable file
·279 lines (261 loc) · 12.6 KB
/
test.sh
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
#!/bin/bash
if [[ $OS_NAME == "macos" ]] && [[ $COMPILER == "gcc" ]]; then
export CXX=g++-11
export CC=gcc-11
elif [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "clang" ]]; then
export CXX=clang++
export CC=clang
fi
if [[ "${TASK}" == "r-package" ]] || [[ "${TASK}" == "r-rchk" ]]; then
bash ${BUILD_DIRECTORY}/.ci/test_r_package.sh || exit -1
exit 0
fi
if [[ "$TASK" == "cpp-tests" ]]; then
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build
if [[ $METHOD == "with-sanitizers" ]]; then
extra_cmake_opts="-DUSE_SANITIZER=ON"
if [[ -n $SANITIZERS ]]; then
extra_cmake_opts="$extra_cmake_opts -DENABLED_SANITIZERS=$SANITIZERS"
fi
else
extra_cmake_opts=""
fi
cmake -DBUILD_CPP_TEST=ON -DUSE_OPENMP=OFF -DUSE_DEBUG=ON $extra_cmake_opts ..
make testlightgbm -j4 || exit -1
./../testlightgbm || exit -1
exit 0
fi
conda create -q -y -n $CONDA_ENV python=$PYTHON_VERSION
source activate $CONDA_ENV
cd $BUILD_DIRECTORY
if [[ $TASK == "check-docs" ]] || [[ $TASK == "check-links" ]]; then
cd $BUILD_DIRECTORY/docs
conda env update \
-n $CONDA_ENV \
--file ./env.yml || exit -1
conda install \
-q \
-y \
-n $CONDA_ENV \
doxygen \
rstcheck || exit -1
# check reStructuredText formatting
cd $BUILD_DIRECTORY/python-package
rstcheck --report warning $(find . -type f -name "*.rst") || exit -1
cd $BUILD_DIRECTORY/docs
rstcheck --report warning --ignore-directives=autoclass,autofunction,doxygenfile $(find . -type f -name "*.rst") || exit -1
# build docs
make html || exit -1
if [[ $TASK == "check-links" ]]; then
# check docs for broken links
pip install --user linkchecker
linkchecker --config=.linkcheckerrc ./_build/html/*.html || exit -1
exit 0
fi
# check the consistency of parameters' descriptions and other stuff
cp $BUILD_DIRECTORY/docs/Parameters.rst $BUILD_DIRECTORY/docs/Parameters-backup.rst
cp $BUILD_DIRECTORY/src/io/config_auto.cpp $BUILD_DIRECTORY/src/io/config_auto-backup.cpp
python $BUILD_DIRECTORY/helpers/parameter_generator.py || exit -1
diff $BUILD_DIRECTORY/docs/Parameters-backup.rst $BUILD_DIRECTORY/docs/Parameters.rst || exit -1
diff $BUILD_DIRECTORY/src/io/config_auto-backup.cpp $BUILD_DIRECTORY/src/io/config_auto.cpp || exit -1
exit 0
fi
if [[ $TASK == "lint" ]]; then
conda install -q -y -n $CONDA_ENV \
cmakelint \
cpplint \
isort \
mypy \
pycodestyle \
pydocstyle \
"r-lintr>=2.0,<3.0"
echo "Linting Python code"
pycodestyle --ignore=E501,W503 --exclude=./.nuget,./external_libs . || exit -1
pydocstyle --convention=numpy --add-ignore=D105 --match-dir="^(?!^external_libs|test|example).*" --match="(?!^test_|setup).*\.py" . || exit -1
isort . --check-only || exit -1
mypy --ignore-missing-imports python-package/ || true
echo "Linting R code"
Rscript ${BUILD_DIRECTORY}/.ci/lint_r_code.R ${BUILD_DIRECTORY} || exit -1
echo "Linting C++ code"
cpplint --filter=-build/c++11,-build/include_subdir,-build/header_guard,-whitespace/line_length --recursive ./src ./include ./R-package ./swig ./tests || exit -1
cmake_files=$(find . -name CMakeLists.txt -o -path "*/cmake/*.cmake")
cmakelint --linelength=120 --filter=-convention/filename,-package/stdargs,-readability/wonkycase ${cmake_files} || exit -1
exit 0
fi
if [[ $TASK == "if-else" ]]; then
conda install -q -y -n $CONDA_ENV numpy
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build && cmake .. && make lightgbm -j4 || exit -1
cd $BUILD_DIRECTORY/tests/cpp_tests && ../../lightgbm config=train.conf convert_model_language=cpp convert_model=../../src/boosting/gbdt_prediction.cpp && ../../lightgbm config=predict.conf output_result=origin.pred || exit -1
cd $BUILD_DIRECTORY/build && make lightgbm -j4 || exit -1
cd $BUILD_DIRECTORY/tests/cpp_tests && ../../lightgbm config=predict.conf output_result=ifelse.pred && python test.py || exit -1
exit 0
fi
if [[ $TASK == "swig" ]]; then
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build
if [[ $OS_NAME == "macos" ]]; then
cmake -DUSE_SWIG=ON -DAPPLE_OUTPUT_DYLIB=ON ..
else
cmake -DUSE_SWIG=ON ..
fi
make -j4 || exit -1
if [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "gcc" ]]; then
objdump -T $BUILD_DIRECTORY/lib_lightgbm.so > $BUILD_DIRECTORY/objdump.log || exit -1
objdump -T $BUILD_DIRECTORY/lib_lightgbm_swig.so >> $BUILD_DIRECTORY/objdump.log || exit -1
python $BUILD_DIRECTORY/helpers/check_dynamic_dependencies.py $BUILD_DIRECTORY/objdump.log || exit -1
fi
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp $BUILD_DIRECTORY/build/lightgbmlib.jar $BUILD_ARTIFACTSTAGINGDIRECTORY/lightgbmlib_$OS_NAME.jar
fi
exit 0
fi
conda install -q -y -n $CONDA_ENV \
cloudpickle \
dask \
distributed \
joblib \
matplotlib \
numpy \
pandas \
psutil \
pytest \
scikit-learn \
scipy || exit -1
# python-graphviz has to be installed separately to prevent conda from downgrading to pypy
conda install -q -y -n $CONDA_ENV \
python-graphviz || exit -1
if [[ $OS_NAME == "macos" ]] && [[ $COMPILER == "clang" ]]; then
# fix "OMP: Error #15: Initializing libiomp5.dylib, but found libomp.dylib already initialized." (OpenMP library conflict due to conda's MKL)
for LIBOMP_ALIAS in libgomp.dylib libiomp5.dylib libomp.dylib; do sudo ln -sf "$(brew --cellar libomp)"/*/lib/libomp.dylib $CONDA_PREFIX/lib/$LIBOMP_ALIAS || exit -1; done
fi
if [[ $TASK == "sdist" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v || exit -1
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz $BUILD_ARTIFACTSTAGINGDIRECTORY
fi
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $TASK == "bdist" ]]; then
if [[ $OS_NAME == "macos" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --plat-name=macosx --python-tag py3 || exit -1
mv dist/lightgbm-$LGB_VER-py3-none-macosx.whl dist/lightgbm-$LGB_VER-py3-none-macosx_10_15_x86_64.macosx_11_6_x86_64.macosx_12_0_x86_64.whl
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp dist/lightgbm-$LGB_VER-py3-none-macosx*.whl $BUILD_ARTIFACTSTAGINGDIRECTORY
fi
else
ARCH=$(uname -m)
if [[ $ARCH == "x86_64" ]]; then
PLATFORM="manylinux1_x86_64"
else
PLATFORM="manylinux2014_$ARCH"
fi
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --plat-name=$PLATFORM --python-tag py3 || exit -1
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp dist/lightgbm-$LGB_VER-py3-none-$PLATFORM.whl $BUILD_ARTIFACTSTAGINGDIRECTORY
fi
fi
pip install --user $BUILD_DIRECTORY/python-package/dist/*.whl || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
fi
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build
if [[ $TASK == "gpu" ]]; then
sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "gpu";/' $BUILD_DIRECTORY/include/LightGBM/config.h
grep -q 'std::string device_type = "gpu"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit -1 # make sure that changes were really done
if [[ $METHOD == "pip" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--gpu || exit -1
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $METHOD == "wheel" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --gpu || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER*.whl -v || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
elif [[ $METHOD == "source" ]]; then
cmake -DUSE_GPU=ON ..
fi
elif [[ $TASK == "cuda" || $TASK == "cuda_exp" ]]; then
if [[ $TASK == "cuda" ]]; then
sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "cuda";/' $BUILD_DIRECTORY/include/LightGBM/config.h
grep -q 'std::string device_type = "cuda"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit -1 # make sure that changes were really done
else
sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "cuda_exp";/' $BUILD_DIRECTORY/include/LightGBM/config.h
grep -q 'std::string device_type = "cuda_exp"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit -1 # make sure that changes were really done
# by default ``gpu_use_dp=false`` for efficiency. change to ``true`` here for exact results in ci tests
sed -i'.bak' 's/gpu_use_dp = false;/gpu_use_dp = true;/' $BUILD_DIRECTORY/include/LightGBM/config.h
grep -q 'gpu_use_dp = true' $BUILD_DIRECTORY/include/LightGBM/config.h || exit -1 # make sure that changes were really done
fi
if [[ $METHOD == "pip" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
if [[ $TASK == "cuda" ]]; then
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--cuda || exit -1
else
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--cuda-exp || exit -1
fi
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $METHOD == "wheel" ]]; then
if [[ $TASK == "cuda" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --cuda || exit -1
else
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --cuda-exp || exit -1
fi
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER*.whl -v || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
elif [[ $METHOD == "source" ]]; then
if [[ $TASK == "cuda" ]]; then
cmake -DUSE_CUDA=ON ..
else
cmake -DUSE_CUDA_EXP=ON ..
fi
fi
elif [[ $TASK == "mpi" ]]; then
if [[ $METHOD == "pip" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--mpi || exit -1
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $METHOD == "wheel" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --mpi || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER*.whl -v || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
elif [[ $METHOD == "source" ]]; then
cmake -DUSE_MPI=ON -DUSE_DEBUG=ON ..
fi
else
cmake ..
fi
make _lightgbm -j4 || exit -1
cd $BUILD_DIRECTORY/python-package && python setup.py install --precompile --user || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
if [[ $TASK == "regular" ]]; then
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
if [[ $OS_NAME == "macos" ]]; then
cp $BUILD_DIRECTORY/lib_lightgbm.so $BUILD_ARTIFACTSTAGINGDIRECTORY/lib_lightgbm.dylib
else
if [[ $COMPILER == "gcc" ]]; then
objdump -T $BUILD_DIRECTORY/lib_lightgbm.so > $BUILD_DIRECTORY/objdump.log || exit -1
python $BUILD_DIRECTORY/helpers/check_dynamic_dependencies.py $BUILD_DIRECTORY/objdump.log || exit -1
fi
cp $BUILD_DIRECTORY/lib_lightgbm.so $BUILD_ARTIFACTSTAGINGDIRECTORY/lib_lightgbm.so
fi
fi
cd $BUILD_DIRECTORY/examples/python-guide
sed -i'.bak' '/import lightgbm as lgb/a\
import matplotlib\
matplotlib.use\(\"Agg\"\)\
' plot_example.py # prevent interactive window mode
sed -i'.bak' 's/graph.render(view=True)/graph.render(view=False)/' plot_example.py
# requirements for examples
conda install -q -y -n $CONDA_ENV \
h5py \
ipywidgets \
notebook
for f in *.py **/*.py; do python $f || exit -1; done # run all examples
cd $BUILD_DIRECTORY/examples/python-guide/notebooks
sed -i'.bak' 's/INTERACTIVE = False/assert False, \\"Interactive mode disabled\\"/' interactive_plot_example.ipynb
jupyter nbconvert --ExecutePreprocessor.timeout=180 --to notebook --execute --inplace *.ipynb || exit -1 # run all notebooks
fi