diff --git a/poetry.lock b/poetry.lock
index e9f37f52..f71e5de7 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
 
 [[package]]
 name = "annotated-types"
@@ -342,22 +342,22 @@ toml = ["tomli"]
 
 [[package]]
 name = "curies"
-version = "0.7.10"
-description = "Idiomatic conversion between URIs and compact URIs (CURIEs)."
+version = "0.8.0"
+description = "Idiomatic conversion between URIs and compact URIs (CURIEs)"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 files = [
-    {file = "curies-0.7.10-py3-none-any.whl", hash = "sha256:ad80f420dd76b6f3e921a245370ff6ab7473c48c29c17254970c03cd2e58af5f"},
-    {file = "curies-0.7.10.tar.gz", hash = "sha256:98a7ceb94710fab3a02727a7f85ba0719dd22be5fc8b5f2ad1d7d4cfc47d64ce"},
+    {file = "curies-0.8.0-py3-none-any.whl", hash = "sha256:da2f47270a778cc3ac5e573c1fcaab5c7f7ea91d9b542ada50d5fafb240997cd"},
+    {file = "curies-0.8.0.tar.gz", hash = "sha256:be743facd2cc33cf3f827e318f846dcc192e7f7787a2bf215cb4c317e94ac02d"},
 ]
 
 [package.dependencies]
-pydantic = "*"
+pydantic = ">=2.0"
 pytrie = "*"
 requests = "*"
 
 [package.extras]
-docs = ["sphinx", "sphinx-automodapi", "sphinx-rtd-theme"]
+docs = ["sphinx (>=8)", "sphinx-automodapi", "sphinx-rtd-theme (>=3.0)"]
 fastapi = ["defusedxml", "fastapi", "httpx", "python-multipart", "uvicorn"]
 flask = ["defusedxml", "flask"]
 pandas = ["pandas"]
@@ -401,21 +401,21 @@ dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "sphinx (<2)", "tox"]
 
 [[package]]
 name = "dnspython"
-version = "2.6.1"
+version = "2.7.0"
 description = "DNS toolkit"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 files = [
-    {file = "dnspython-2.6.1-py3-none-any.whl", hash = "sha256:5ef3b9680161f6fa89daf8ad451b5f1a33b18ae8a1c6778cdf4b43f08c0a6e50"},
-    {file = "dnspython-2.6.1.tar.gz", hash = "sha256:e8f0f9c23a7b7cb99ded64e6c3a6f3e701d78f50c55e002b839dea7225cff7cc"},
+    {file = "dnspython-2.7.0-py3-none-any.whl", hash = "sha256:b4c34b7d10b51bcc3a5071e7b8dee77939f1e878477eeecc965e9835f63c6c86"},
+    {file = "dnspython-2.7.0.tar.gz", hash = "sha256:ce9c432eda0dc91cf618a5cedf1a4e142651196bbcd2c80e89ed5a907e5cfaf1"},
 ]
 
 [package.extras]
-dev = ["black (>=23.1.0)", "coverage (>=7.0)", "flake8 (>=7)", "mypy (>=1.8)", "pylint (>=3)", "pytest (>=7.4)", "pytest-cov (>=4.1.0)", "sphinx (>=7.2.0)", "twine (>=4.0.0)", "wheel (>=0.42.0)"]
-dnssec = ["cryptography (>=41)"]
+dev = ["black (>=23.1.0)", "coverage (>=7.0)", "flake8 (>=7)", "hypercorn (>=0.16.0)", "mypy (>=1.8)", "pylint (>=3)", "pytest (>=7.4)", "pytest-cov (>=4.1.0)", "quart-trio (>=0.11.0)", "sphinx (>=7.2.0)", "sphinx-rtd-theme (>=2.0.0)", "twine (>=4.0.0)", "wheel (>=0.42.0)"]
+dnssec = ["cryptography (>=43)"]
 doh = ["h2 (>=4.1.0)", "httpcore (>=1.0.0)", "httpx (>=0.26.0)"]
-doq = ["aioquic (>=0.9.25)"]
-idna = ["idna (>=3.6)"]
+doq = ["aioquic (>=1.0.0)"]
+idna = ["idna (>=3.7)"]
 trio = ["trio (>=0.23)"]
 wmi = ["wmi (>=1.5.1)"]
 
@@ -828,13 +828,13 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-
 
 [[package]]
 name = "jsonschema-specifications"
-version = "2023.12.1"
+version = "2024.10.1"
 description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 files = [
-    {file = "jsonschema_specifications-2023.12.1-py3-none-any.whl", hash = "sha256:87e4fdf3a94858b8a2ba2778d9ba57d8a9cafca7c7489c46ba0d30a8bc6a9c3c"},
-    {file = "jsonschema_specifications-2023.12.1.tar.gz", hash = "sha256:48a76787b3e70f5ed53f1160d2b81f586e4ca6d1548c5de7085d1682674764cc"},
+    {file = "jsonschema_specifications-2024.10.1-py3-none-any.whl", hash = "sha256:a09a0680616357d9a0ecf05c12ad234479f549239d0f5b55f3deea67475da9bf"},
+    {file = "jsonschema_specifications-2024.10.1.tar.gz", hash = "sha256:0f38b83639958ce1152d02a7f062902c41c8fd20d558b0c34344292d417ae272"},
 ]
 
 [package.dependencies]
@@ -842,13 +842,13 @@ referencing = ">=0.31.0"
 
 [[package]]
 name = "linkml"
-version = "1.8.3"
+version = "1.8.4"
 description = "Linked Open Data Modeling Language"
 optional = false
 python-versions = "<4.0.0,>=3.8.1"
 files = [
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-    {file = "linkml-1.8.3.tar.gz", hash = "sha256:6bf65f3d6c4ce9e88af0fda71b954ae4c6f5e885f8b4d74c1090380d565e76ba"},
+    {file = "linkml-1.8.4-py3-none-any.whl", hash = "sha256:9fa26d7e522dd98568d0313e363abd67c2b17a671f31595c9e53beaec27b7214"},
+    {file = "linkml-1.8.4.tar.gz", hash = "sha256:a1918d226ab5c268e260ddc7cfa6edb53d7faab3fb0144efef5fad572b052c36"},
 ]
 
 [package.dependencies]
@@ -879,8 +879,9 @@ watchdog = ">=0.9.0"
 
 [package.extras]
 black = ["black (>=24.0.0)"]
+numpydantic = ["numpydantic (>=1.6.1)"]
 shacl = ["pyshacl (>=0.25.0,<0.26.0)"]
-tests = ["black (>=24.0.0)", "pyshacl (>=0.25.0,<0.26.0)"]
+tests = ["black (>=24.0.0)", "numpydantic (>=1.6.1)", "pyshacl (>=0.25.0,<0.26.0)"]
 
 [[package]]
 name = "linkml-dataops"
@@ -902,13 +903,13 @@ linkml-runtime = ">=1.1.6"
 
 [[package]]
 name = "linkml-runtime"
-version = "1.8.2"
+version = "1.8.3"
 description = "Runtime environment for LinkML, the Linked open data modeling language"
 optional = false
 python-versions = "<4.0,>=3.8"
 files = [
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+    {file = "linkml_runtime-1.8.3-py3-none-any.whl", hash = "sha256:0750920f1348fffa903d99e7b5834ce425a2a538285aff9068dbd96d05caabd1"},
+    {file = "linkml_runtime-1.8.3.tar.gz", hash = "sha256:5b7f682eef54aaf0a59c50eeacdb11463b43b124a044caf496cde59936ac05c8"},
 ]
 
 [package.dependencies]
@@ -946,71 +947,72 @@ testing = ["coverage", "pyyaml"]
 
 [[package]]
 name = "markupsafe"
-version = "2.1.5"
+version = "3.0.1"
 description = "Safely add untrusted strings to HTML/XML markup."
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.9"
 files = [
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 [[package]]
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 [[package]]
@@ -1428,9 +1430,9 @@ files = [
 
 [package.dependencies]
 numpy = [
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 python-dateutil = ">=2.8.2"
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 [package.extras]
@@ -1734,13 +1736,13 @@ jsonasobj = ">=1.2.1"
 
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 ]
 
 [package.dependencies]
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@@ -2560,7 +2562,7 @@ files = [
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@@ -2568,7 +2570,7 @@ files = [
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@@ -2576,7 +2578,7 @@ files = [
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+    {file = "ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_24_aarch64.whl", hash = "sha256:a1a45e0bb052edf6a1d3a93baef85319733a888363938e1fc9924cb00c8df24c"},
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@@ -2794,24 +2796,24 @@ sqlcipher = ["sqlcipher3_binary"]
 
 [[package]]
 name = "tomli"
-version = "2.0.1"
+version = "2.0.2"
 description = "A lil' TOML parser"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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-    {file = "tomli-2.0.1.tar.gz", hash = "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"},
+    {file = "tomli-2.0.2-py3-none-any.whl", hash = "sha256:2ebe24485c53d303f690b0ec092806a085f07af5a5aa1464f3931eec36caaa38"},
+    {file = "tomli-2.0.2.tar.gz", hash = "sha256:d46d457a85337051c36524bc5349dd91b1877838e2979ac5ced3e710ed8a60ed"},
 ]
 
 [[package]]
 name = "types-python-dateutil"
-version = "2.9.0.20240906"
+version = "2.9.0.20241003"
 description = "Typing stubs for python-dateutil"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -2869,41 +2871,41 @@ zstd = ["zstandard (>=0.18.0)"]
 
 [[package]]
 name = "watchdog"
-version = "5.0.2"
+version = "5.0.3"
 description = "Filesystem events monitoring"
 optional = false
 python-versions = ">=3.9"
 files = [
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+    {file = "watchdog-5.0.3.tar.gz", hash = "sha256:108f42a7f0345042a854d4d0ad0834b741d421330d5f575b81cb27b883500176"},
 ]
 
 [package.extras]
@@ -3025,4 +3027,4 @@ type = ["pytest-mypy"]
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.9"
-content-hash = "a7af9fc3010fc2508f5bb0782240325b4ac7b8822b078ca7edddbbc65cc75cd0"
+content-hash = "66d85f7aabd3fae397f61f071a2f4e5ea0361eba5fe846213e9b5e6bcdc759c7"
diff --git a/pyproject.toml b/pyproject.toml
index 1ee5a6f8..51c545b2 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -12,7 +12,7 @@ python = "^3.9"
 pymongo = "^4.3.3"
 pyYAML = "^6.0"
 requests = "^2.28.2"
-nmdc-schema = "^11.0.0rc22"
+nmdc-schema = "^11.0.1"
 deepdiff = "^6.2.1"
 pytz = "^2023.3"
 python-dotenv = "^1.0.0"