Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

create more subslots of alternative_identifiers #409

Closed
Tracked by #587
turbomam opened this issue Aug 17, 2022 · 3 comments
Closed
Tracked by #587

create more subslots of alternative_identifiers #409

turbomam opened this issue Aug 17, 2022 · 3 comments
Labels
EMSL gold identifiers Tickets associated with identifier updates or needs

Comments

@turbomam
Copy link
Member

eg for IMG_taxon_identifier

also make sure there are validation patterns for all of these because the id prefixes attribute is currently "suggestion only"

@mslarae13
Copy link
Contributor

Relates to #369 . 369 will inform what additional slots are needed.
Success for this ticket looks like

  • slots to capture common alternate identifiers are created and added to the schema.
  • all slots have clear descriptions, examples, and validation / syntax requirements
  • Slots are clearly connected / the identifiers hierarchy is well laid out (example, a GOLD biosample identifier IS an alternate_identifier... but could also have alternate_identifiers that are less commonly used)
  • Projects in the data portal / mongoDB are updated to correctly reflect the new ordering of alternative_identifiers & each alternative_identifier is in the correct slot (when source slots are greated, like INSDC).

@mslarae13 mslarae13 added the identifiers Tickets associated with identifier updates or needs label Sep 12, 2022
@turbomam
Copy link
Member Author

made slots for emsl and img biosample identifiers

this will be an ongoing task

@aclum
Copy link
Contributor

aclum commented Nov 1, 2023

this is marked done on the squad board so closing this issue.

@aclum aclum closed this as completed Nov 1, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
EMSL gold identifiers Tickets associated with identifier updates or needs
Projects
No open projects
Development

No branches or pull requests

3 participants