From 38c075b2455266fd568b89c7e76ce6d1f857ba19 Mon Sep 17 00:00:00 2001 From: "Mark A. Miller" Date: Fri, 16 Feb 2024 13:00:25 -0500 Subject: [PATCH] see problematic_triad_* files for FMA problems --- data-vs-ontology-reports.Makefile | 4 ++-- data-vs-ontology-reports/fma-usage-report.tsv | 1 - 2 files changed, 2 insertions(+), 3 deletions(-) delete mode 100644 data-vs-ontology-reports/fma-usage-report.tsv diff --git a/data-vs-ontology-reports.Makefile b/data-vs-ontology-reports.Makefile index f66c324..dabd161 100644 --- a/data-vs-ontology-reports.Makefile +++ b/data-vs-ontology-reports.Makefile @@ -81,8 +81,8 @@ data-vs-ontology-reports/biosample-triad-counts.tsv: --output $(subst counts.tsv,report.tsv,$@) \ --counts-output $@ -data-vs-ontology-reports/fma-usage-report.tsv: data-vs-ontology-reports/biosample-triad-counts.tsv - grep 'FMA:' $< > $@ +#data-vs-ontology-reports/fma-usage-report.tsv: data-vs-ontology-reports/biosample-triad-counts.tsv +# grep 'FMA:' $< > $@ data-vs-ontology-reports/nmdco-envo-classes-with-id-owner.tsv: data-vs-ontology-reports/envo-id-ranges-report.tsv nmdco-classes.json $(RUN) report-nmdco-envo-classes-by-id-owners \ diff --git a/data-vs-ontology-reports/fma-usage-report.tsv b/data-vs-ontology-reports/fma-usage-report.tsv deleted file mode 100644 index 9c0f7a5..0000000 --- a/data-vs-ontology-reports/fma-usage-report.tsv +++ /dev/null @@ -1 +0,0 @@ -FMA:14541 66 FMA 14541