From 896b051f55210553b558fddc6ab7a312e3958d7e Mon Sep 17 00:00:00 2001 From: Bill Duncan Date: Tue, 17 Aug 2021 12:48:20 -0400 Subject: [PATCH] remove uneeded files --- projects.yaml | 27 --------------------------- query.Makefile | 42 ------------------------------------------ 2 files changed, 69 deletions(-) delete mode 100644 projects.yaml delete mode 100644 query.Makefile diff --git a/projects.yaml b/projects.yaml deleted file mode 100644 index 58400c9..0000000 --- a/projects.yaml +++ /dev/null @@ -1,27 +0,0 @@ -id: nmdco -title: "NMDC Ontology" -github_org: microbiomedata -repo: nmdc-ontology -report_fail_on: none -release_artefacts: - - full - - non-classified - - relation-graph -primary_release: full -export_formats: - - owl -components: - products: - - id: po - filename: po.owl - source: http://purl.obolibrary.org/obo/po.owl - - id: envo - filename: envo.owl - source: http://purl.obolibrary.org/obo/envo.owl -import_group: - products: - - id: ro - module_type: slme - slme_individuals: exclude -robot_java_args: '-Xmx12G' -relation_graph_relations: [] diff --git a/query.Makefile b/query.Makefile deleted file mode 100644 index 7c3c089..0000000 --- a/query.Makefile +++ /dev/null @@ -1,42 +0,0 @@ -# This makefile is mainly used to run sparql query on the nmdco onotology -# To create ontology files, use the Makefile in src/ontology -ONT= nmdco -ROBOT= robot - -.PHONY: .FORCE test-query - -test-query: - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/nmdco-test.sparql subset-files/temp.tsv - -subset-files/astronomical-body-parts.tsv: .FORCE - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/astronomical-body-parts.sparql $@ - -subset-files/astronomical-body-parts-and-manufactured-products.tsv: .FORCE - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/astronomical-body-parts-and-manufactured-products.sparql $@ - -subset-files/non-terrestrial-biomes.tsv: .FORCE - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/non-terrestrial-biomes.sparql $@ - -subset-files/terrestrial-biomes.tsv: .FORCE - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/terrestrial-biomes.sparql $@ - -subset-files/soil-environmental-materials.tsv: .FORCE - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/soil-environmental-materials.sparql $@ - -subset-files/manufactured-products.tsv: .FORCE - $(ROBOT) query \ - --input $(ONT)-relation-graph.owl \ - --query src/sparql/manufactured-products.sparql $@ -