diff --git a/schema/nmdc.yaml b/schema/nmdc.yaml index a51e568..6f9a441 100644 --- a/schema/nmdc.yaml +++ b/schema/nmdc.yaml @@ -434,7 +434,29 @@ classes: description: >- combined MS1 extracted ion chromatograms derived from MS2 spectra associated with the peptide sequence from a given LC-MS/MS data file using the MASIC tool range: integer - + + protein quantification: + description: >- + This is used to link a metaproteomics analysis workflow to a specific protein + slot_usage: + best protein: + description: >- + the specific protein identifier most correctly grouped to its associated peptide sequences + range: gene product + all proteins: + description: >- + the grouped list of protein identifiers associated with the peptide sequences that were grouped to a best protein + range: gene product + multivalued: true + spectral_count: + description: >- + sum of filter passing MS2 spectra associated with the best protein within a given LC-MS/MS data file + range: integer + sum_masic_abundance: + description: >- + combined MS1 extracted ion chromatograms derived from MS2 spectra associated with the best protein from a given LC-MS/MS data file using the MASIC tool + range: integer + person: is_a: named thing description: >-