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283 sync with nmdc metamags outputs #286

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merged 13 commits into from
Aug 26, 2024
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@chienchi chienchi commented Aug 23, 2024

  • add Total bases and Gene count into stats.json
  • add .phylodist.txt and .crispr.txt. Remove cathfunfam smart and supfam
  • update corresponding UI changes.
  • use NMDC wdl file container version by default, not overwrite in NMDC-EDGE.

Single workflow
https://dev.nmdc-edge.org/user/project?code=POZI1isNRvY1YCZR
Whole MetaG workflow
https://dev.nmdc-edge.org/user/project?code=5NGBxgq1hgCgicaS
(the pop up warning on dev site is because the Opaver service for annotation result vis is only on production site. It should find the correct json file on production site.)

@chienchi chienchi linked an issue Aug 23, 2024 that may be closed by this pull request
@chienchi chienchi merged commit 4b1d821 into main Aug 26, 2024
@chienchi chienchi deleted the 283-sync-with-nmdc-metamags-outputs branch August 26, 2024 04:24
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sync with NMDC metaMAGs outputs
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