diff --git a/interleave_rqcfilter.wdl b/interleave_rqcfilter.wdl index e1f8ef7..70d2af2 100644 --- a/interleave_rqcfilter.wdl +++ b/interleave_rqcfilter.wdl @@ -190,7 +190,7 @@ task rqcfilter{ File stat = filename_stat File stat2 = filename_stat2 File info_file = filename_reproduce - File filtered = glob("filtered/*fastq.gz")[0] + File filtered = glob("filtered/*.anqrpht.fastq.gz")[0] File json_out = filename_stat_json } runtime {