From 27b42051e78a3fae8abbb08ce8c7a60a6bcdc276 Mon Sep 17 00:00:00 2001
From: Chienchi Lo <chien-chi@pn2034281.lanl.gov>
Date: Thu, 7 Nov 2024 12:58:32 -0700
Subject: [PATCH] add jq to bbtools image

---
 Docker/BBtools_Dockerfile.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/Docker/BBtools_Dockerfile.txt b/Docker/BBtools_Dockerfile.txt
index 6db9bfd..bc6ebb8 100644
--- a/Docker/BBtools_Dockerfile.txt
+++ b/Docker/BBtools_Dockerfile.txt
@@ -20,7 +20,7 @@ ENV JAVA_URL=https://download.java.net/java/GA/jdk13.0.1/cec27d702aa74d5a8630c65
 ENV JAVA_SHA256=2e01716546395694d3fad54c9b36d1cd46c5894c06f72d156772efbcf4b41335
 
 
-RUN apt-get update && apt-get install -y build-essential file python zlib1g-dev \
+RUN apt-get update && apt-get install -y build-essential file python zlib1g-dev jq && \
   wget samtools curl && \
   apt-get autoclean && rm -rf /var/lib/apt/lists/*