diff --git a/zamp/rules/DB_processing/format_n_train_classifiers.rules b/zamp/rules/DB_processing/format_n_train_classifiers.rules index 404cd74..c65a298 100644 --- a/zamp/rules/DB_processing/format_n_train_classifiers.rules +++ b/zamp/rules/DB_processing/format_n_train_classifiers.rules @@ -127,9 +127,12 @@ rule RDP_train: mem_mb=get_mem_mb(RDP_MEM), shell: """ - rdp_classifier \ - -Xmx{params.mem} -XX:ConcGCThreads={threads} \ - train -o {params.out} -s {input.fa} -t {input.tax} + rdp_classifier \\ + -Xmx{params.mem} -XX:ConcGCThreads={threads} \\ + train \\ + -o {params.out} \\ + -s {input.fa} \\ + -t {input.tax} """