diff --git a/README.md b/README.md index 749e3ed..8c783a1 100644 --- a/README.md +++ b/README.md @@ -52,6 +52,8 @@ abundances["abundances (sequence, taxonomic)"] --> depth end style community_design color:#15161a +style community_design color:#15161a + fasta --> simulator depth --> simulator @@ -138,11 +140,8 @@ Outputs described in more details [here](https://metagenlab.github.io/MeSS/guide #### :bar_chart: Resources usage - On average, using `samples.tsv` (see [table](#arrow_right-input)), MeSS runs in under 2min, while using around 1.8GB of physical RAM - - | task_id | hash | native_id | name | status | exit | submit | duration | realtime | %cpu | peak_rss | peak_vmem | rchar | wchar | | ------- | --------- | --------- | -------- | --------- | ---- | ----------------------- | -------- | -------- | ------ | -------- | --------- | ------ | ------ | | 1 | fe/03c2bc | 62286 | MESS (1) | COMPLETED | 0 | 2024-09-04 12:41:15.820 | 1m 50s | 1m 50s | 111.5% | 1.8 GB | 9 GB | 3.5 GB | 2.4 GB | @@ -152,11 +151,8 @@ On average, using `samples.tsv` (see [table](#arrow_right-input)), MeSS runs in > [!NOTE] - > Average resources usage measured 3 times with one CPU (within a [nextflow](https://github.com/nextflow-io/nextflow) process) -> - > Resources usage was measured exluding dependencies deployement time (conda env creation or container pulling)