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Severe artifacts and blur in 2D phase reconstruction #172

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ziw-liu opened this issue Jul 3, 2024 · 2 comments · Fixed by #175
Open

Severe artifacts and blur in 2D phase reconstruction #172

ziw-liu opened this issue Jul 3, 2024 · 2 comments · Fixed by #175
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@ziw-liu
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ziw-liu commented Jul 3, 2024

Reconstructing 2D phase introduces checkerboard artifacts and blur (20x 0.55NA):

/hpc/projects/comp.micro/virtual_staining/datasets/iNeurons/20240416_Exp01_iN_day7_calcein_hoescht/1-reconstruction/phase_2d.yaml
image

3D phase:

image

The same problem was previously found in an OPS experiment (5x 0.13NA).
@ziw-liu ziw-liu added the bug Something isn't working label Jul 3, 2024
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ziw-liu commented Jul 3, 2024

Possibly related to #152.

@talonchandler talonchandler mentioned this issue Sep 10, 2024
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@talonchandler talonchandler linked a pull request Sep 10, 2024 that will close this issue
Wrap-safe transfer functions #175
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ziw-liu commented Nov 10, 2024

Reopening as this is not yet fixed: #175 (comment)

@ziw-liu ziw-liu reopened this Nov 10, 2024
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Wrap-safe transfer functions mehta-lab/waveorder
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