From ed7395c9729476839ba21a93119e1749d41071e3 Mon Sep 17 00:00:00 2001
From: Clinton Huynh <clinton.huynh@czbiohub.org>
Date: Wed, 12 Jul 2023 15:14:38 -0700
Subject: [PATCH 1/2] get methods

---
 .../java/org/micromanager/data/internal/DefaultDatastore.java | 4 ++++
 .../data/internal/multipagetiff/MultipageTiffReader.java      | 4 ++++
 .../data/internal/multipagetiff/StorageMultipageTiff.java     | 4 ++++
 3 files changed, 12 insertions(+)

diff --git a/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java b/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java
index e7624a7466..c25bbd1424 100644
--- a/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java
+++ b/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java
@@ -153,6 +153,10 @@ public void setStorage(Storage storage) {
       storage_ = storage;
    }
 
+   public Storage getStorage() {
+      return storage_;
+   }
+
    /**
     * Registers objects at default priority levels.
     *
diff --git a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java
index 7bea99bd0b..a81aedf280 100644
--- a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java
+++ b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java
@@ -114,6 +114,10 @@ public void setFileChannel(FileChannel fc) {
       fileChannel_ = fc;
    }
 
+   public HashMap<Coords, Long> getCoordsToOffset() {
+      return coordsToOffset_;
+   }
+
    /**
     * This constructor is used for opening datasets that have already been saved.
     */
diff --git a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java
index a5cb772aec..cef6d84d3c 100644
--- a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java
+++ b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java
@@ -175,6 +175,10 @@ public StorageMultipageTiff(Component parent, Datastore store, String dir,
       }
    }
 
+   public Map<Coords, MultipageTiffReader> getCoordsToReader() {
+      return coordsToReader_;
+   }
+
    /**
     * Signals the arrival of new Summary Metadata.
     *

From 1ad8226fc33aa0eab645eda33c022aecbc66d893 Mon Sep 17 00:00:00 2001
From: Clinton Huynh <clinton.huynh@czbiohub.org>
Date: Thu, 3 Aug 2023 11:52:01 -0700
Subject: [PATCH 2/2] documentation for getter methods

---
 .../java/org/micromanager/data/internal/DefaultDatastore.java  | 3 +++
 .../data/internal/multipagetiff/MultipageTiffReader.java       | 3 +++
 .../data/internal/multipagetiff/StorageMultipageTiff.java      | 3 +++
 3 files changed, 9 insertions(+)

diff --git a/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java b/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java
index c25bbd1424..3432081198 100644
--- a/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java
+++ b/mmstudio/src/main/java/org/micromanager/data/internal/DefaultDatastore.java
@@ -153,6 +153,9 @@ public void setStorage(Storage storage) {
       storage_ = storage;
    }
 
+   /**
+    * Returns the Storage of the current datastore.
+    */
    public Storage getStorage() {
       return storage_;
    }
diff --git a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java
index a81aedf280..a36c73d35a 100644
--- a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java
+++ b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/MultipageTiffReader.java
@@ -114,6 +114,9 @@ public void setFileChannel(FileChannel fc) {
       fileChannel_ = fc;
    }
 
+   /**
+    * Returns the HashMap that links Coords to their byte offset. 
+    */
    public HashMap<Coords, Long> getCoordsToOffset() {
       return coordsToOffset_;
    }
diff --git a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java
index cef6d84d3c..09f84487a0 100644
--- a/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java
+++ b/mmstudio/src/main/java/org/micromanager/data/internal/multipagetiff/StorageMultipageTiff.java
@@ -175,6 +175,9 @@ public StorageMultipageTiff(Component parent, Datastore store, String dir,
       }
    }
 
+   /**
+    * Returns the Map that links Coords to their MulitpageTiffReader
+    */
    public Map<Coords, MultipageTiffReader> getCoordsToReader() {
       return coordsToReader_;
    }