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Medical MVP: MONAI research #40

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bcebere opened this issue Jul 21, 2020 · 0 comments
Open

Medical MVP: MONAI research #40

bcebere opened this issue Jul 21, 2020 · 0 comments

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@bcebere
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bcebere commented Jul 21, 2020

We need to know the limits of MONAI.
They have:

  • Datasets: MedNISTDataset, DecathlonDataset
  • Network blocks highlights: atrous spatial pyramid pooling module.
  • Dataset loaders: GridPatchDataset might be useful.
  • Inference: Sliding Window Inference.
  • Losses: DiceLoss, MaskedDiceLoss, FocalLoss, TverskyLoss,
  • Existing Nets: Densenet3D, Highresnet, Unet, Generator, Regressor, Classifier, Discriminator, Critic
  • Metrics: Mean dice, Area under the ROC curve

Do we want to extend it to NLP?
Do we need another architecture?

The research might impact our demo dataset.

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