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Hyperparameter cross validation #25

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merged 28 commits into from
Nov 24, 2023
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cca2a29
fix: add zref and density args to inversion
mdtanker Nov 23, 2023
82ce1fd
fix: removes references to density and zref
mdtanker Nov 24, 2023
ede48c3
fix: remove python 3.12 support, add test for 3.10
mdtanker Nov 24, 2023
ca5601d
chore: specify semantic release options
mdtanker Nov 24, 2023
d0bd675
chore: remove pypy from testing versions
mdtanker Nov 24, 2023
20c9aea
feat: add cross validation module
mdtanker Nov 24, 2023
f940939
feat: add cross validation plot function
mdtanker Nov 24, 2023
c1c64a2
build: add tqdm and seaborn deps
mdtanker Nov 24, 2023
fef9387
docs: update simple_inversion.ipynb
mdtanker Nov 24, 2023
f3d3e89
docs: add damping_cross_validation.ipynb
mdtanker Nov 24, 2023
b085100
docs: add damping_cross_validation.ipynb to guide
mdtanker Nov 24, 2023
30e39b5
style: formatting cross_validation.py
mdtanker Nov 24, 2023
a391799
Merge branch 'main' into damping_cross_val
mdtanker Nov 24, 2023
3c65c4c
fix: allow matplotlib and seaborn to be optional
mdtanker Nov 24, 2023
619057a
chore: update deps in .yml and mapping
mdtanker Nov 24, 2023
d199599
chore: add github action workflow
mdtanker Nov 24, 2023
0a424e3
style: pre-commit fixes
pre-commit-ci[bot] Nov 24, 2023
ebc5e2e
style: format fix
mdtanker Nov 24, 2023
39f9e6b
Merge branch 'damping_cross_val' of https://github.com/mdtanker/inver…
mdtanker Nov 24, 2023
619915f
chore: update release check
mdtanker Nov 24, 2023
b637c79
chore: updating release check
mdtanker Nov 24, 2023
91594fd
chore: remove semantic release check action
mdtanker Nov 24, 2023
6122e32
fix: restructure damping cross validation
mdtanker Nov 24, 2023
fa792ab
feat: add constraints cv functions
mdtanker Nov 24, 2023
d7bc456
docs: reorganized damping CV notebook
mdtanker Nov 24, 2023
96bcd0d
docs: restructured simple inversion notebook
mdtanker Nov 24, 2023
b89196b
docs: restructured starting model notebook
mdtanker Nov 24, 2023
31cbd6d
docs: add density and zref CV notebooks
mdtanker Nov 24, 2023
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16 changes: 14 additions & 2 deletions docs/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -37,20 +37,32 @@

intersphinx_mapping = {
"python": ("https://docs.python.org/3", None),
#
# Runtime deps
#
"numpy": ("https://docs.scipy.org/doc/numpy/", None),
"pandas": ("http://pandas.pydata.org/pandas-docs/stable/", None),
"xarray": ("http://xarray.pydata.org/en/stable/", None),
"verde": ("https://www.fatiando.org/verde/latest/", None),
"rioxarray": ("https://corteva.github.io/rioxarray/stable/", None),
# pykdgree
# pykdtree
"xrft": ("https://xrft.readthedocs.io/en/stable/", None),
"harmonica": ("https://www.fatiando.org/harmonica/latest/", None),
"antarctic_plots": ("https://antarctic-plots.readthedocs.io/en/latest/", None),
"numba": ("https://numba.pydata.org/numba-doc/latest/", None),
"scipy": ("https://docs.scipy.org/doc/scipy/reference", None),
# nptyping
# "matplotlib": ("https://matplotlib.org/", None),
# numba_progress
"tqdq": ("https://tqdm.github.io/", None),
# "pygmt": ("https://www.pygmt.org/latest/", None),
#
# Viz deps
#
"pyvista": ("https://docs.pyvista.org/", None),
# trame
# ipywidgets
"matplotlib": ("https://matplotlib.org/", None),
"seaborn": ("https://seaborn.pydata.org/", None),
}

nitpick_ignore = [
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3 changes: 3 additions & 0 deletions docs/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -14,6 +14,9 @@ gallery/index
:hidden:
:caption: User guide
user_guide/simple_inversion
user_guide/damping_cross_validation
user_guide/density_cross_validation
user_guide/reference_level_cross_validation
user_guide/including_starting_model
user_guide/adhering_to_constraints
```
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