DESCRIPTION

Package: InterCellar
Title: InterCellar: an R-Shiny app for interactive analysis and exploration of
        cell-cell communication in single-cell transcriptomics
Version: 2.1.2
Authors@R: person('Marta', 'Interlandi', email = 'marta.interlandi01@gmail.com', role = c('cre', 'aut'), comment = c(ORCID = "0000-0002-6863-2552") )
Description: InterCellar is implemented as an R/Bioconductor Package
  containing a Shiny app that allows users to interactively analyze cell-cell 
  communication from scRNA-seq data. Starting from precomputed ligand-receptor
  interactions, InterCellar provides filtering options, annotations and multiple visualizations
  to explore clusters, genes and functions. Finally, based on functional annotation from Gene 
  Ontology and pathway databases, InterCellar implements data-driven analyses to investigate
  cell-cell communication in one or multiple conditions.
License: MIT + file LICENSE
Imports: 
    config,
    golem,
    shiny,
    DT,
    shinydashboard,
    shinyFiles,
    shinycssloaders,
    data.table,
    fs,
    dplyr,
    tidyr,
    circlize,
    colourpicker,
    dendextend,
    factoextra,
    ggplot2,
    plotly,
    plyr,
    shinyFeedback,
    shinyalert,
    tibble,
    umap,
    visNetwork,
    wordcloud2,
    readxl,
    htmlwidgets,
    colorspace,
    signal,
    scales,
    htmltools,
    ComplexHeatmap,
    grDevices,
    stats,
    tools,
    utils,
    biomaRt,
    rlang,
    fmsb,
    igraph
Encoding: UTF-8
RoxygenNote: 7.1.1
Suggests: 
    testthat (>= 3.0.0),
    knitr,
    rmarkdown,
    glue,
    graphite,
    processx,
    attempt,
    BiocStyle,
    httr
Config/testthat/edition: 3
URL: https://github.com/martaint/InterCellar
BugReports: https://github.com/martaint/InterCellar/issues
VignetteBuilder: knitr
biocViews: Software, SingleCell, Visualization, GO, Transcriptomics
Depends: R (>= 4.1)