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DESCRIPTION
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Type: Package
Package: GeSciLiVis
Title: Gene-Based Publication Activity Visualiser
Version: 1.2.0
Authors@R: c(
person("Marina","Leer",email="[email protected]",role = c("aut", "cre","cph")),
person("George", "Soultoukis", role = c("ctb")),
person("Masoome", "Oveisi", role = c("ctb")),
person("German Research Foundation", role = c("fnd")),
person("German Ministry of Education and Research ", role = c("fnd")),
person("State of Brandenburg", role = c("fnd")))
Description: Visualising publication activity per gene based on a gene list and a user-defined set of keywords utilising R 'rentrez' <https://cran.r-project.org/package=rentrez/> that provides 'NCBI' <https://www.ncbi.nlm.nih.gov> database search like in 'PubMed' <https://pubmed.ncbi.nlm.nih.gov>. It summarises the retrieved number of publications for each gene in an overview bar plot (saved as 'png' file) and by choice a summary table (as 'csv') that including the most recent 100 'PubMed' IDs and publication titles.
License: GPL (>= 3)
Depends:
R (>= 2.10)
Imports:
rentrez (>= 1.2.3),
biomartr (>= 1.0.2),
grDevices (>= 4.2.0),
graphics (>= 4.2.0),
utils (>= 4.2.0)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
LazyData: true
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr