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Writing a macro script to run the Finetune model #87

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zakaria-grid opened this issue Apr 1, 2022 · 0 comments
Open

Writing a macro script to run the Finetune model #87

zakaria-grid opened this issue Apr 1, 2022 · 0 comments

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@zakaria-grid
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Hi,

I wanted to create a macro script to run the Finetune model in headless mode, I tried the following script but it seems that this is not the right way to call the model. Any thoughts? Thanks,

call('de.unifreiburg.unet.FinetuneJob','modelFilename=/path/2d_cell_net_v0.modeldef.h5,weightsFilename=/path/2d_cell_net_v0.caffemodel.h5,gpuId=arglist,useRemoteHost=false,host=,username=,password=,TileShape=,trainFileList=/DIC-Erythrocytes/6hr-002-DIC.tif,validFileList =/DIC-Erythrocytes/6hr-001-DIC.tif,iterations=500, validationInterval=10,Id=/output/2D_Cell_erythrocytes, outModelDef=/output/ery.modeldef.h5, outWeights=/output/ery.model.h5');

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